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21 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Non-coding RNA profiling by high throughput sequencing			NARROWPEAK
GSE65698	Pluripotent mouse Embryonic Stem Cells and during Retinoic Acid-induced differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	20	NARROWPEAK	Michal Stachowiak	May 01, 2015
GSE77005	The Schizophrenia Risk Gene Product Satb2 Regulates miRNAs Expression and Long-Term Memory in Adult CNS	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	40	BED NARROWPEAK TXT SRA Run Selector	Gaurav Jain	Dec 12, 2016
GSE88738	Cooptation of tandem DNA repeats for the control of epithelial-to-mesenchymal transition.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	20	NARROWPEAK	Chiara Balestrieri	May 02, 2018
GSE133600	The RNA N6-methyladenosine regulates chromatin remodeling and transcription	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	122	NARROWPEAK TXT	Xiaoyang Dou	Jan 17, 2020
GSE134798	Nucleosomes protect DNA from irradiation-induced double strand breaks in living cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Homo sapiens Mus musculus	34	BED BEDGRAPH NARROWPEAK	Jose Manuel Garcia-Manteiga	Jul 07, 2020
GSE135791	Pachytene piRNA Genes Are Rapidly Diverging Among Modern Humans	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus	72	BW NARROWPEAK TXT SRA Run Selector	Tianxiong Yu	Dec 23, 2019
GSE157556	Insights into the regulation of the brain-placental axis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	42	COV NARROWPEAK	Susanta K. Behura	Aug 27, 2021
GSE171934	Molecular and biological functions of ZMP in Arabidopsis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana	60	BW NARROWPEAK TXT	Meera Nair	Apr 03, 2023
GSE197319	SOX6 Gatekeeps Oligodendrocyte Maturation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	50	BED BW NARROWPEAK	Paul Tesar	Sep 01, 2023
GSE216290	HDAC1 regulates the chromatin landscape to control transcriptional dependencies in chronic lymphocytic leukemia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	71	BROADPEAK NARROWPEAK	Ayse Selen Yilmaz	Oct 25, 2022
GSE225889	Unistrand piRNA clusters are an evolutionarily conserved mechanism to suppress endogenous retroviruses across the Drosophila genus	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Drosophila ananassae Drosophila azteca Drosophila biarmipes Drosophila erecta Drosophila ficusphila Drosophila melanogaster Drosophila mojavensis Drosophila persimilis Drosophila pseudoobscura Drosophila simulans Drosophila subobscura Drosophila suzukii Drosophila takahashii Drosophila virilis Drosophila yakuba	118	BW NARROWPEAK	Susanne Bornelöv	Sep 26, 2023
GSE227928	Selective gene expression maintains human tRNA anticodon pools during differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Homo sapiens	97	BEDGRAPH BROADPEAK NARROWPEAK	Danny Nedialkova	Oct 22, 2023
GSE239617	lncRNA-ZFAS1, an emerging gate-keeper in DNA damage-dependent transcriptional regulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Homo sapiens	88	BW NARROWPEAK	Yuming Wang	Aug 03, 2023
GSE254487	MaizeCODE reveals bi-directionally expressed enhancers that harbor molecular signatures of maize domestication [B73 RNA]	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Zea mays	30	NARROWPEAK TXT	Jonathan Cahn	Feb 23, 2024
GSE254488	MaizeCODE reveals bi-directionally expressed enhancers that harbor molecular signatures of maize domestication [NC350 RNA]	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Zea mays	30	NARROWPEAK TXT	Jonathan Cahn	Feb 23, 2024
GSE254489	MaizeCODE reveals bi-directionally expressed enhancers that harbor molecular signatures of maize domestication [W22 RNA]	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Zea mays	30	NARROWPEAK TXT	Jonathan Cahn	Feb 23, 2024
GSE254490	MaizeCODE reveals bi-directionally expressed enhancers that harbor molecular signatures of maize domestication [TIL11 RNA]	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Zea mays subsp. parviglumis	26	NARROWPEAK TXT	Jonathan Cahn	Feb 23, 2024
GSE254496	MaizeCODE reveals bi-directionally expressed enhancers that harbor molecular signatures of maize domestication	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Zea mays Zea mays subsp. parviglumis	226	BROADPEAK BW NARROWPEAK TXT	Jonathan Cahn	Feb 23, 2024
GSE255914	Drosha loss drives pineoblastoma by upregulating Ccnd2	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Mus musculus	64	BED BIGWIG BW NARROWPEAK	Kenneth S Chen	Oct 03, 2024
GSE152831	SNPC-1.3 is a sex-specific transcription factor drives male piRNA expression in C. elegans	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Caenorhabditis elegans	43	NARROWPEAK TXT SRA Run Selector	Margaret R Starostik	Dec 17, 2020