GEO Browser - GEO

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152 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other	Homo sapiens		TAR
GSE81026	Cis Regulatory Element Scan by Tiling-deletion and Sequencing	Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens synthetic construct	23	BED BW PDF TAR SRA Run Selector	Bing Ren	Apr 17, 2017
GSE124409	Nuclear peripheral chromatin-lamin B1 interaction is required for global integrity of chromatin architecture and dynamics in human cells	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	20	BED BW MATRIX TAR TXT SRA Run Selector	Mengfan Li	Nov 08, 2020
GSE130140	Cancer-specific CTCF binding facilitates oncogenic transcriptional dysregulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Homo sapiens	92	BED BW COV MATRIX NARROWPEAK SF TAR TXT SRA Run Selector	Zhenjia Wang	Aug 19, 2020
GSE130306	DNMT1 drives 4D genome rewiring during oncogene induced senescence	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Homo sapiens	92	BED BW TAR TXT SRA Run Selector	Satish Sati	Mar 27, 2020
GSE130990	Co-incidence of RCC-susceptibility polymorphisms with HIF cis-acting sequences supports a pathway tuning model of cancer	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	10	BED BIGWIG TAR	David Robert Mole	Dec 31, 2019
GSE138767	Simultaneous analysis of open chromatin, promoter interactions and gene expression in stimulated T cells implicates GWAS SNPs with causal genes	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens	36	BED CSV NARROWPEAK TAR TXT SRA Run Selector	Paul Martin	Oct 31, 2019
GSE174554	A single cell atlas of human glioma under therapy	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	113	BED MTX TAR TSV TXT ZIP	Aaron Diaz	Jul 05, 2022
GSE212482	Multiomic analysis reveals conservation of cancer associated fibroblast phenotypes across species and tissue of origin	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	26	BED MTX TAR TSV	Michael Januszyk	Oct 21, 2022
GSE218274	PAX3-FOXO1 expression in endothelial progenitors dictates myogenic reprogramming and rhabdomyosarcoma identity	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	75	BED BW HIC TAR TDF TXT	Hongjian Jin	Sep 29, 2023
GSE223772	Linking CRISPR/Cas9 double-strand break profiles to gene editing precision with BreakTag	Other	Homo sapiens	220	BED TAR TXT VCF	Sergi Sayols	Apr 03, 2024
GSE214811	Stage-specific erythroid cell three-dimensional chromatin architecture and transcription factors binding provide insight of human erythropoiesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens	99	BEDGRAPH BIGWIG MCOOL MTX TAR TSV	Dong Li	May 06, 2023
GSE228822	Potent and uniform fetal hemoglobin induction via base editing	Expression profiling by high throughput sequencing Other	Homo sapiens	39	BEDGRAPH BW TAR TXT YAML	Jonanthan Yen	Apr 28, 2023
GSE118207	PARCB Project: Reprogramming normal human epithelial tissues to a common, lethal neuroendocrine cancer lineage	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens	74	BIGWIG TAR TXT	Owen N Witte	Oct 05, 2018
GSE118494	Involvement of Condensin in Cellular Senescence through Gene Regulation and Compartmental Reorganization	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	50	BW TAR TXT SRA Run Selector	Hideki Tanizawa	Nov 06, 2019
GSE143678	Consticted migration is associated with stable 3D genome structure differences in cancer cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	43	BW TAR	Rosela Golloshi	Jun 29, 2022
GSE160174	Induction of T cell dysfunction and NK-like T cell differentiation in vitro and in patients after CAR T cell treatment	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	65	BW CLOUPE CSV TAR	Gregory Donahue	Dec 06, 2021
GSE183993	Heterochromatin rewiring and domain disruption-mediated chromatin compaction during erythropoiesis	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens	48	BW HIC TAR TXT	Hsiang-Ying Lee	Jul 31, 2023
GSE201262	Impaired histone inheritance promotes tumor progression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	126	BW TAR	haiyun gan	May 15, 2023
GSE211214	Identifying gene combinations for targeting innate immune cells to enhance T cells activation	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	81	BW NARROWPEAK TAR	Oren Parnas	Sep 13, 2023
GSE218988	CRISPR-based epigenome editing screens identify transcriptional and epigenetic regulators of human CD8 T cell function	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	75	BW NARROWPEAK TAR	Sean McCutcheon	May 24, 2023