GEO Browser - GEO

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1338 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other	Homo sapiens		BW
GSE43542	H3K4me3 Interactions with TAF3 Regulate Preinitiation Complex Assembly and Selective Gene Activation	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	16	BED BW TXT	Xiaolin Wu	Mar 02, 2013
GSE74250	Transcriptome analysis of diverse cell types infected with human cytomegalovirus	Expression profiling by array Expression profiling by high throughput sequencing Other	Homo sapiens	40	BED BEDGRAPH BW CEL	Gene Yeo	Sep 17, 2016
GSE75356	A zebrafish melanoma model reveals emergence of neural crest identity during melanoma initiation	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Danio rerio Homo sapiens	48	BW NARROWPEAK	Leonard Zon	Feb 01, 2016
GSE76055	Regulation of enhancer dynamics by MED12	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	48	BW CEL TDF WIG	Beatriz Aranda-Orgilles	Aug 25, 2016
GSE77634	Enhanced CLIP (eCLIP) enables robust and scalable transcriptome-wide discovery and characterization of RNA binding protein binding sites	Expression profiling by array Expression profiling by high throughput sequencing Other	Homo sapiens	100	BB BED BW CEL	Gene Yeo	Mar 28, 2016
GSE86464	HNRNPA2B1 regulates alternative RNA processing in the nervous system and accumulates in granules in ALS IPSC-derived motor neurons	Expression profiling by array Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Homo sapiens Mus musculus	124	BED BW CEL CSV	Gene Yeo	Oct 20, 2016
GSE126123	LncRNA HAND2-AS1 controls liver cancer stem cell functions and serves as a potential therapy target	Expression profiling by array Other	Homo sapiens	14	BW TXT	Runsheng Chen	Feb 06, 2019
GSE148321	Dietary palmitic acid promotes a prometastatic epigenetic memory related to tumor innervation	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	1134	BROADPEAK BW CEL MTX TSV XLS ZIP	Antoni Berenguer-LLergo	Nov 16, 2021
GSE161100	An RFX/miR-150 axis restrains proliferation of primary human T lymphocytes	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	58	BW RCC	Francesco Gualdrini	Jan 10, 2022
GSE43801	Enrichment of processed pseudogene transcripts in L1-ribonucleoprotein particles	Expression profiling by high throughput sequencing Other	Homo sapiens	5	BW SRA Run Selector	Adam D Ewing	May 21, 2013
GSE44267	Cohesin and CTCF Differentially Affect the Chromatin Architecture and Gene Expression in Human Cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	18	BW RPKM TXT SRA Run Selector	Jesse R Dixon	Dec 16, 2013
GSE60358	Mammalian NET-seq reveals genome-wide nascent transcription coupled to RNA processing	Expression profiling by high throughput sequencing Other	Homo sapiens	28	BW SRA Run Selector	Tomás Gomes	Apr 23, 2015
GSE62063	B cell super-enhancers and regulatory clusters recruit AID tumorigenic activity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	76	BED BW TAB WIG SRA Run Selector	Marei Dose	Dec 04, 2014
GSE62296	Convergent Sense/Antisense Transcription At Intragenic Super-Enhancers Targets AID-initiated Genomic Instability	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	9	BW SRA Run Selector	Feilong Meng	Dec 04, 2014
GSE63375	Pre-mRNA Splicing is Facilitated by an Optimal RNA Polymerase II Elongation Rate	Expression profiling by high throughput sequencing Other	Homo sapiens	40	BW TXT SRA Run Selector	David L. Bentley	Nov 25, 2014
GSE66383	Disruptions of Topological Chromatin Domains Causes Pathogenic Rewiring of Gene-Enhancer Interactions	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	31	BEDGRAPH BW	Darío G Lupiáñez	May 08, 2015
GSE68401	Enhancer activation during EGF response	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	30	BW SRA Run Selector	Alessandro Gardini	Aug 25, 2015
GSE69143	7SK-BAF axis controls pervasive transcription at enhancers	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	74	BW	Ryan Alexander Flynn	Feb 01, 2016
GSE69738	Gene body H2B1ub regulates RNA Polymerase II pause release and is not needed for transcription elongation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	18	BIGWIG BW TXT SRA Run Selector	Eran Rosenthal	Jun 10, 2018
GSE70408	PAF1, a molecular regulator of promoter-proximal pausing by RNA Polymerase II	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Drosophila melanogaster Homo sapiens	61	BW SRA Run Selector	Ali Shilatifard	Aug 13, 2015