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13 series

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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Other	Homo sapiens			HIC
GSE110061	Direct DNA crosslinking with CAP-C uncovers transcription-dependent chromatin organization at high resolution	Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster Homo sapiens Mus musculus	76		BIGWIG HIC NARROWPEAK TXT SRA Run Selector	Youzhi Cheng	Aug 22, 2020
GSE162511	Single-cell transcriptome and 3D genome atlas of the developing mouse brain	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	4314		HIC TXT	Longzhi Tan	Jan 07, 2021
GSE169121	Tcf1 is essential for initiation of oncogenic Notch1-driven chromatin topology.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	61		BEDGRAPH BEDPE HIC TXT	Nadine Fournier	Jan 21, 2022
GSE176066	NicE-C efficiently reveals open chromatin associated chromosome interactions at high resolution	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	32		BW HIC SRA Run Selector	Zhengyu Luo	Jan 18, 2022
GSE211176	The hyperconnected 3D clique at the Ets1 locus is required for T cell function (Hi-C)	Other	Homo sapiens Mus musculus	5		HIC	Golnaz Vahedi	Jun 20, 2023
GSE211178	The hyperconnected 3D clique at the Ets1 locus is required for T cell function	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	67		BED HIC TSV	Golnaz Vahedi	Jun 20, 2023
GSE212252	Balanced SET levels favor the correct enhancer repertoire during cell fate acquisition	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Danio rerio Homo sapiens Mus musculus	80		BROADPEAK HIC NARROWPEAK TAB	Luca Massimino	Sep 12, 2022
GSE213597	ETV6 Represses Inflammatory Response Genes and Regulates HSPC Function During Stress Hematopoiesis in Mice	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	27		BED BW HIC MTX TBI TSV	Kim Nichols	Aug 24, 2023
GSE214692	Dissecting developmental disorders caused by CTCF mutation at R567	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	71		BW CSV HIC MTX NARROWPEAK TSV	gongcheng Hu	May 05, 2024
GSE218274	PAX3-FOXO1 expression in endothelial progenitors dictates myogenic reprogramming and rhabdomyosarcoma identity	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	75		BED BW HIC TAR TDF TXT	Hongjian Jin	Sep 29, 2023
GSE232490	A multiscale 3D chromatin architecture that controls development of the humoral immune system is assembled by IKAROS	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	120		BEDGRAPH BW HIC TBI	Katia Georgopoulos	Nov 20, 2023
GSE246859	ChromaFold predicts the 3D contact map from single-cell chromatin accessibility	Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	3		HIC TSV	Christina Leslie	Aug 31, 2024
GSE266349	Remodeling of Il4-Il13-Il5 locus underlies selective gene expression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	138		BED BW HIC	Maria Morasso	Sep 25, 2024