GEO Browser - GEO

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57 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Other	Homo sapiens		BW
GSE87064	The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	868	BED BW MTX TSV TXT	Beisi Xu	May 03, 2017
GSE144336	Defining genome architecture at base-pair resolution	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	40	BW SRA Run Selector	Peng Hua	Apr 16, 2021
GSE153651	m6A directs the demethylation of histone H3K9me2 co-transcriptionall	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	56	BED BW TXT SRA Run Selector	linjian xia	Jul 01, 2020
GSE171758	Profiling histone modifications in clinical archived formalin fixed paraffin embedded samples	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	60	BW TXT SRA Run Selector	xingqi chen	Sep 03, 2021
GSE175803	m6Am RNA methyltransferases PCIF1 regulate tumorigenesis of colorectal cancer and its immune responses to anti-PD-1 therapy	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	26	BW CSV TSV TXT SRA Run Selector	Lingling Wang	Nov 12, 2022
GSE176066	NicE-C efficiently reveals open chromatin associated chromosome interactions at high resolution	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	32	BW HIC SRA Run Selector	Zhengyu Luo	Jan 18, 2022
GSE180175	Hi-TrAC reveals fine-scale chromatin structures organized by transcription factors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	136	BEDPE BW TXT SRA Run Selector	Yaqiang Cao	Oct 02, 2022
GSE182304	Locus-specific chromatin profiling of evolutionarily young transposable elements [HiChIP]	Other	Homo sapiens Mus musculus	3	BW SRA Run Selector	Miguel R Branco	Aug 19, 2021
GSE182305	Locus-specific chromatin profiling of evolutionarily young transposable elements [Hi-C]	Other	Homo sapiens Mus musculus	3	BW SRA Run Selector	Miguel R Branco	Aug 19, 2021
GSE182306	Locus-specific chromatin profiling of evolutionarily young transposable elements	Other	Homo sapiens Mus musculus	6	BW	Miguel R Branco	Aug 19, 2021
GSE183806	Chromatin architecture of B cell development during the humoral immune response	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	107	BIGWIG BW MCOOL NARROWPEAK SF	Ashley Stephen Doane	Sep 09, 2021
GSE184894	SMYD5 catalyzes histone H3 lysine 36 trimethylation at promoters	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	223	BW TXT SRA Run Selector	Dong Fang	Apr 26, 2022
GSE185708	A hyper-quiescent chromatin state is a barrier to productive regeneration during aging.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	256	BW TXT	Supriyo De	Mar 17, 2023
GSE190324	RBM45 is an m6A-binding protein that affects neuronal differentiation and the splicing of a subset of pre-mRNAs	Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	104	BED BW MATRIX	Kate Meyer	Aug 30, 2022
GSE197608	Short C-terminal Musashi-1 proteins regulate pluripotency states in embryonic stem cells	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	24	BEDGRAPH BW TXT XLSX	Gufa Lin	Nov 05, 2023
GSE197926	TAD Evolutionary and functional characterization reveals diversity in mammalian TAD boundary properties and function	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Hylobates moloch Macaca mulatta Mus caroli Mus musculus Mus pahari Nomascus leucogenys Rattus norvegicus	85	BED BEDGRAPH BIGWIG BW COOL XLSX	Mariam Okhovat	Oct 20, 2023
GSE198250	High depth profiling of miRNA targets with chimeric eCLIP [eCLIPseq]	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus Rattus norvegicus	188	BED BW TSV	Gene Yeo	Jul 30, 2022
GSE198251	High depth profiling of miRNA targets with chimeric eCLIP	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus Rattus norvegicus	204	BED BW TSV	Gene Yeo	Jul 29, 2022
GSE198517	Inhibition of SWI/SNF broadly disrupts enhancers and reveals remodeler redundancy at promoters	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	107	BW TSV XLSX	Karen Adelman	Nov 02, 2023
GSE198658	G-quadruplexes sense natural porphyrin metabolites for regulation of gene transcription and chromatin landscapes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	48	BW	Yin Zhinang	Nov 23, 2022