Accession | Title | Series type(s) | Organism(s) | Samples | GDS | Supplementary | Contact | Release date |
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GSE154353 |
A single-cell method to map higher-order 3D genome organization in thousands of individual cells reveals structural heterogeneity in mouse ES cells
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3 | Mary Villanueva Arrastia | Aug 12, 2020 | ||
GSE182304 |
Locus-specific chromatin profiling of evolutionarily young transposable elements [HiChIP]
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3 | Miguel R Branco | Aug 19, 2021 | ||
GSE182305 |
Locus-specific chromatin profiling of evolutionarily young transposable elements [Hi-C]
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3 | Miguel R Branco | Aug 19, 2021 | ||
GSE246859 |
ChromaFold predicts the 3D contact map from single-cell chromatin accessibility
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3 | Christina Leslie | Aug 31, 2024 | |||
GSE235848 |
Transcriptional circuits that regulate early T cell precursor acute leukemia
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4 | Javier Rodriguez Hernaez | Jul 03, 2023 | ||
GSE211176 |
The hyperconnected 3D clique at the Ets1 locus is required for T cell function (Hi-C)
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5 | Golnaz Vahedi | Jun 20, 2023 | ||
GSE174226 |
High-content single-cell combinatorial indexing
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6 | Ryan M Mulqueen | May 28, 2021 | |||
GSE182306 |
Locus-specific chromatin profiling of evolutionarily young transposable elements
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6 | Miguel R Branco | Aug 19, 2021 | ||
GSE188954 |
Transcriptomics of skin reveal potential molecular mechanisms of psoriasis
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6 | Dijun Chen | Dec 17, 2021 | |||
GSE219069 |
ssDRIP-seq: a high-throughput method for R-loop mapping and quantitative assessment
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6 | Changbin Sun | Jun 12, 2024 | ||
GSE285230 |
Droplet-based high-throughput 3D genome structure mapping of single cells with simultaneous transcriptomics (cell-line)
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6 | Xiaoliang Sunney Xie | Jan 10, 2025 | ||
GSE164956 |
Robust RNA editing via recruitment of endogenous ADARs using circular guide RNAs
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7 | Dario Meluzzi | Nov 15, 2021 | ||
GSE164997 |
Genome-wide determinants of Tn5 insertion preference
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8 | Kuangyu Yen | Oct 01, 2021 | ||
GSE193494 |
MAE-seq refines regulatory elements across the genome
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8 | JING LUO | Jan 06, 2023 | ||
GSE255378 |
Targeting lipid metabolism in pancreatic cancer
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9 | Brian Magnuson | Apr 10, 2024 | |||
GSE188416 |
The PAF1 Complex Regulates Transcriptional Termination and Reinitiation [TT-seq]
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10 | Aiwei Wu | Nov 06, 2024 | ||
GSE218127 |
U1 snRNP increases RNA Pol II elongation rate to enable synthesis of long genes [TT-Seq]
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10 | Claudia A Mimoso | Mar 24, 2023 | ||
GSE218128 |
U1 snRNP increases RNA Pol II elongation rate to enable synthesis of long genes [PRO-seq]
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10 | Claudia A Mimoso | Mar 24, 2023 | ||
GSE202040 |
High-resolution transcriptional analysis of immunoglobulin variable regions reveals the absence of direct relationships between somatic hypermutation, nascent transcription and epigenetic marks [PRO-cap]
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11 | Maximilian Christian von der Linde | Jun 22, 2024 | ||
GSE274641 |
Spatially exploring RNA biology in archival formalin-fixed paraffin-embedded tissues
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11 | Rong Fan | Aug 12, 2024 |