Self-reporting transposons enable simultaneous readout of gene expression and transcription factor binding in single cells

Hierarchical chromatin regulation during blood formation uncovered by single-cell sortChIC

The energetics and physiological impact of cohesin extrusion

Transcriptome Mapping of Internal N7-methylguanosine Methylome in Mammalian mRNA

HOXBLINC is aberrantly expressed in acute myeloid leukemia and functions as a potent oncogenic long non-coding RNA in leukemogenesis

NET-CAGE Characterizes the Dynamics and Topology of Human Transcribed Cis-regulatory Elements

Control of noncoding RNA production and histone levels by a 5’ tRNA fragment

In situ capture of global transcription dynamics and enhancer activity with high accuracy and sensitivity 

Genome-wide detection of DNA double-strand breaks by in-suspension BLISS

Deep and accurate detection of m6A RNA modifications in human and mouse cells using miCLIP2 and m6Aboost machine learning [a]

Epigenomic Activation of Enhancers in Granule Cell Precursors by CHARGE Syndrome Protein CHD7 Regulates Gyrification of the Mammalian Cerebellum

MacroH2A histone variants modulate enhancer activity to repress oncogenic programs and cellular reprogramming

Next Generation Sequencing to check the enrichment of RIPK1/BAF on chromatin, RIPK1-dependent chromatin state and RIPK1-dependent transcriptome during inflammatory responses.

G4access identifies G-quadruplexes and their associations with open chromatin and imprinting control regions. Nat Genet (2023). https://doi.org/10.1038/s41588-023-01437-4

High-throughput single-base resolution mapping of 2’-O-Methylated residues

The mitochondrial single-stranded DNA binding protein directs RNA primer formation for mtDNA replication

UTX condensation underlies its tumor suppressive activity

Episomal HBV persistence within transcribed host nuclear chromatin compartments involves HBx

Direct DNA crosslinking with CAP-C uncovers transcription-dependent chromatin organization at high resolution

Sequencing short capped RNAs captures acute transcription initiation and identifies promoter and distal regulatory elements across eukaryotes from total RNA