GEO Browser - GEO

Series

Samples

Platforms

DataSets

27 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Other	Homo sapiens		BED
GSE76420	LncRNA DINO guides DNA damage signaling	Expression profiling by array Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	56	BED NARROWPEAK	Adam Schmitt	Dec 30, 2015
GSE85164	DHX9 suppresses spurious RNA processing defects originating from the Alu invasion of the human genome	Expression profiling by high throughput sequencing Other	Drosophila melanogaster Homo sapiens Mus musculus	90	BED BIGWIG	Asifa Akhtar	Mar 28, 2017
GSE88817	In situ CAPTURE of chromatin interactions by biotinylated dCas9	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	175	BED WIG	Jian Xu	Aug 24, 2017
GSE98119	The energetics and physiological impact of cohesin extrusion	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	352	BED BEDGRAPH BW HIC NARROWPEAK TXT SRA Run Selector	Seolkyoung Jung	May 01, 2018
GSE100733	LRPPRC-mediated folding of the mitochondrial transcriptome	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	28	BED BEDGRAPH TXT	Stefan J Siira	Nov 21, 2017
GSE115096	HOXBLINC is aberrantly expressed in acute myeloid leukemia and functions as a potent oncogenic long non-coding RNA in leukemogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	40	BED TXT SRA Run Selector	Suming Huang	Jan 27, 2021
GSE118075	NET-CAGE Characterizes the Dynamics and Topology of Human Transcribed Cis-regulatory Elements	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	144	BED SRA Run Selector	Shruti Bhagat	Jun 10, 2019
GSE127247	Control of noncoding RNA production and histone levels by a 5’ tRNA fragment	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	48	BED XLSX SRA Run Selector	Mike Levine	Jan 17, 2020
GSE134798	Nucleosomes protect DNA from irradiation-induced double strand breaks in living cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Homo sapiens Mus musculus	34	BED BEDGRAPH NARROWPEAK	Jose Manuel Garcia-Manteiga	Jul 07, 2020
GSE139117	Analysis of CRE-mediated chromatin interactions by CAPTURE2.0	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	105	BED BW WIG	Jian Xu	Feb 20, 2020
GSE139420	In situ capture of global transcription dynamics and enhancer activity with high accuracy and sensitivity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	78	BED BIGWIG XLS SRA Run Selector	Ruitu Lyu	Feb 15, 2020
GSE163491	Deep and accurate detection of m6A RNA modifications in human and mouse cells using miCLIP2 and m6Aboost machine learning [a]	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	22	BED BW TXT SRA Run Selector	Kathi Zarnack	Jun 05, 2021
GSE164360	Epigenomic Activation of Enhancers in Granule Cell Precursors by CHARGE Syndrome Protein CHD7 Regulates Gyrification of the Mammalian Cerebellum	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	104	BED TXT XLSX SRA Run Selector	Naveen Reddy	Apr 07, 2021
GSE171599	MacroH2A histone variants modulate enhancer activity to repress oncogenic programs and cellular reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	44	BED BIGWIG BW H5 SRA Run Selector	Alexandre Gaspar-Maia	Feb 21, 2023
GSE179018	Next Generation Sequencing to check the enrichment of RIPK1/BAF on chromatin, RIPK1-dependent chromatin state and RIPK1-dependent transcriptome during inflammatory responses.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	73	BED BW TXT SRA Run Selector	Wanjin Li	Jul 13, 2022
GSE187007	G4access identifies G-quadruplexes and their associations with open chromatin and imprinting control regions. Nat Genet (2023). https://doi.org/10.1038/s41588-023-01437-4	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster Homo sapiens Mus musculus Saccharomyces cerevisiae	63	BED WIG SRA Run Selector	Amal Makrini	Apr 14, 2023
GSE189502	Mutant-SETBP1 activates transcription of Myc programs to accelerate CSF3R-driven myeloproliferative neoplasms	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	56	BED BW CSV RDS TSV TXT	Sarah Ann Carratt	May 11, 2022
GSE197060	Development of nanoRibo-seq enables study of regulated translation by cortical neuron subtypes, showing uORF translation in synaptic-axonal genes	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	45	BED CSV TXT	John Edward Froberg	Aug 25, 2023
GSE199431	Position-dependent function of human sequence-specific transcription factors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Chlorocebus sabaeus Homo sapiens Mus musculus	56	BED FA TSV TXT	Christopher Benner	Apr 26, 2024
GSE207163	Transcriptional repression by a secondary DNA binding surface of DNA topoisomerase I safeguards against hypertranscription	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	62	BED BW RESULTS TXT XLSX	Zhenhua hu	May 29, 2023