63 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
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GSE124150
Transcription factor induction of vascular blood stem cell niches in vivo [TOMO-Seq]
  • Other
  • Link icon Danio rerio
1 Leonard Zon Mar 23, 2023
GSE146738
3'GAmES: Systematic refinement of gene termini by mRNA 3' end sequencing
  • Other
  • Link icon Danio rerio
1 Stefan Ludwig Ameres Mar 11, 2020
GSE75351
A zebrafish melanoma model reveals emergence of neural crest identity during melanoma initiation [ATAC-Seq]
  • Other
  • Link icon Danio rerio
2 Leonard Zon Feb 01, 2016
GSE173604
Ribosome profiling analysis of zebrafish embryos injected with the codon tag reporter library
  • Link icon Danio rerio
2 Peixun Han Dec 06, 2021
GSE61065
ATAC-seq data in mouse and zebrafish limbs
  • Other
3
  • Download icon BW
  • Download icon SRA Run Selector
Juan J. Tena Jan 06, 2015
GSE87604
The embryo-larval and adult parts of the zebrafish major alpha/beta-globin gene locus are functionally and structurally independent
  • Other
  • Link icon Danio rerio
4 Aleksandra Galitsyna Jul 12, 2017
GSE97067
Transcriptome analysis on wild type and ddx39a mutant zebrafish embryos by Next Generation Sequencing
  • Link icon Danio rerio
4 Yuxi Yang Mar 28, 2017
GSE109219
The evolutionary emergence of the rac3b/rfng/sgca regulatory cluster refined mechanisms for hindbrain boundaries formation
  • Link icon Danio rerio
4 Juan J. Tena Apr 25, 2018
GSE133392
Defining codon-mediated mRNA decay and No-go decay in zebrafish embryos
  • Link icon Danio rerio
4 Peixun Han May 05, 2020
GSE138920
Dynamic Properties of the Reissner Fiber and Implications on Scoliosis II
  • Other
  • Link icon Danio rerio
4 Bo Zhang Oct 14, 2020
GSE169161
RIP-seq for Ddx3xb in zebrafish embryos
  • Other
  • Link icon Danio rerio
4 Bao-Fa Sun Jun 03, 2022
GSE52830
Obesity-associated variants within FTO form long-range functional connections with IRX3
  • Other
6 Juan J. Tena Feb 24, 2014
GSE115233
sox32 Alleles Generated from Four-guide Cas9 RNP Targeting in G0 Zebrafish Embryos
  • Other
  • Link icon Danio rerio
6 Roland S Wu Jul 01, 2018
GSE121114
Neuromesodermal Progenitors are a Conserved Source of Spinal Cord with Divergent Growth Dynamics
  • Other
  • Link icon Danio rerio
6 Maria Florescu Nov 01, 2018
GSE74231
Enhancers reside in a unique epigenetic environment during early zebrafish development [ChIP-seq & ATAC-seq]
  • Link icon Danio rerio
7 lucas kaaij Nov 06, 2015
GSE38125
Transcriptomic profiles of zebrafish embryos exposed to silver (nanoparticles, bulk and ions) using HT-SuperSAGE in a Illumina GA2 platform
  • Other
  • Link icon Danio rerio
8 Ronny van Aerle Jun 17, 2013
GSE156097
CTCF knockout in zebrafish induces alterations in regulatory landscapes and developmental gene expression [Hi-C]
  • Other
  • Link icon Danio rerio
8 José M. Santos-Pereira Aug 02, 2021
GSE169168
Ribosome profiling RNA sequencing in zebrafish embryos
  • Link icon Danio rerio
8 Bao-Fa Sun Jun 03, 2022
GSE61063
Chromatin structure dynamics of hoxa13a, hoxa13b and hoxd13a loci during zebrafish development.
  • Other
  • Link icon Danio rerio
9 Juan J. Tena Jan 06, 2015
GSE152741
Chromatin architecture transitions from zebrafish sperm through early embryogenesis [Hi-C]
  • Other
  • Link icon Danio rerio
9 Bradley R Cairns Apr 05, 2021