GEO Browser - GEO

Series

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DataSets

24 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Other	synthetic construct
GSE63473	Highly parallel genome-wide expression profiling of individual cells using nanoliter droplets	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus synthetic construct	203	BAM FASTA GTF TXT	Evan Macosko	May 20, 2015
GSE112599	Genome-wide CRISPR-Cas9 interrogation of splicing networks reveals a mechanism for recognition of autism-misregulated neuronal microexons [CRISPR screen]	Other	Mus musculus synthetic construct	49	TAB XLSX SRA Run Selector	Ulrich Braunschweig	Oct 12, 2018
GSE112601	Genome-wide CRISPR-Cas9 interrogation of splicing networks reveals a mechanism for recognition of autism-misregulated neuronal microexons	Expression profiling by high throughput sequencing Other	Mus musculus synthetic construct	122		Ulrich Braunschweig	Oct 12, 2018
GSE115547	Determination of branch point (BP) usage by wild-type and mutant SF3B1 using a minigene library	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus synthetic construct	7	TXT SRA Run Selector	MANOJ PILLAI	Oct 30, 2018
GSE145643	Functional characterization of thousands of type 2 diabetes-associated and chromatin-modulating variants under steady state and endoplasmic reticulum stress	Other	Mus musculus synthetic construct	9	FA TXT SRA Run Selector	Shubham Khetan	Feb 21, 2020
GSE157139	CRISPR and biochemical screens identify MAZ as a co-factor in CTCF-mediated insulation at Hox clusters	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus synthetic construct	138	BEDGRAPH BW HIC NARROWPEAK TXT	Danny Reinberg	Feb 06, 2022
GSE159488	A versatile platform for locus-scale genome rewriting and verification	Other	Homo sapiens Mus musculus synthetic construct	44	BW SRA Run Selector	Mathew T Maurano	Jan 14, 2021
GSE161657	Identifying non-genetic determinants of malignant clonal fitness at single cell resolution (primary leukaemia barcode-seq)	Other	Mus musculus synthetic construct	14	FASTA TXT SRA Run Selector	Mark Dawson	Nov 08, 2021
GSE161676	Identifying non-genetic determinants of malignant clonal fitness at single cell resolution	Expression profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus synthetic construct	271	BED MTX SEG TSV VCF	Mark Dawson	Nov 08, 2021
GSE167352	Non-coding CRISPR interference screen to identify regulatory elements of Xist in TX1072 XX SP107 mESCs at the onset of random X inactivation	Other	Mus musculus synthetic construct	11	TXT SRA Run Selector	Till Schwämmle	Mar 04, 2021
GSE169020	MapToCleave: high-throughput profiling of microRNA biogenesis in living cells	Non-coding RNA profiling by high throughput sequencing Other	Homo sapiens Mus musculus synthetic construct	56	TXT SRA Run Selector	Marc Riemer Friedländer	Nov 16, 2021
GSE185666	Dual Chromatin Repressors Regulate Hippocampal Development	Expression profiling by high throughput sequencing Other	Mus musculus synthetic construct	2	MTX TSV SRA Run Selector	Kai-Chun Chang	Feb 01, 2022
GSE192435	CRISPR and biochemical screens Identify MAZ as a co-factor in CTCF-mediated insulation at Hox Clusters [CRISPR_set8]	Other	Mus musculus synthetic construct	13	TXT SRA Run Selector	Danny Reinberg	Feb 06, 2022
GSE198728	Paired single-cell host profiling with multiplex-tagged bacterial mutants reveals intracellular virulence-immune networks	Expression profiling by high throughput sequencing Other	Mus musculus synthetic construct	136	TXT	Noa Bossel Ben-Moshe	Jun 21, 2023
GSE210051	DNA barcoding reveals ongoing immunoediting of clonal cancer populations during metastatic progression and in response to immunotherapy [DNA barcodes: IT_and_cont_4T1_BC250000]	Other	Mus musculus synthetic construct	34	TXT XLSX	Alexander Swarbrick	Aug 02, 2022
GSE210057	DNA barcoding reveals ongoing immunoediting of clonal cancer populations during metastatic progression and in response to immunotherapy	Other Expression profiling by high throughput sequencing	Mus musculus synthetic construct	207		Alexander Swarbrick	Aug 01, 2022
GSE215065	Regulation of mouse chamber selective enhancers	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Mus musculus synthetic construct	82	BW TXT	Xiaoran Zhang	Jan 30, 2023
GSE216091	Targeting MYC effector functions in pancreatic cancer by inhibiting the ATPase RUVBL1/2 (Screen)	Other	Mus musculus synthetic construct	20	CSV	Elmar Wolf	Jun 01, 2024
GSE216095	Targeting MYC effector functions in pancreatic cancer by inhibiting the ATPase RUVBL1/2	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Mus musculus synthetic construct	87	BEDGRAPH	Elmar Wolf	Jun 01, 2024
GSE218472	Enhancer grammar of liver cell types and hepatocyte zonation states	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus synthetic construct	79	BW TSV	Carmen Bravo Gonzalez-Blas	Sep 07, 2023