GEO Browser - GEO

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19 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other	Rattus norvegicus		BW
GSE99119	RNA binding protein DDX1 is responsible for fatty acid mediated repression of insulin translation	Other	Rattus norvegicus	2	BW SRA Run Selector	Wen Zhong	May 21, 2019
GSE110652	Genome-wide map of proximity linkage to renin proximal promoter in rat	Other	Rattus norvegicus	6	BED BW SRA Run Selector	Mingyu Liang	Feb 14, 2019
GSE127793	Characterization of Npas4 and heterodimer DNA binding in stimulated and silenced rat neurons	Other Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	24	BED BW TXT SRA Run Selector	Michael Hayes	Oct 02, 2019
GSE129924	Free circular introns with an unusual branchpoint in neuronal projections	Expression profiling by high throughput sequencing Other	Rattus norvegicus	22	BIGWIG BW SRA Run Selector	Harleen Saini	Apr 18, 2019
GSE131103	Analysis of a long noncoding RNAs that modulate neurotransmitter release	Non-coding RNA profiling by high throughput sequencing Other	Rattus norvegicus	20	BW SRA Run Selector	Raza Ur Rahman	Apr 10, 2020
GSE161241	MiR-124 synergism with ELAVL3 enhances target gene expression to promote neuronal maturity	Other Expression profiling by high throughput sequencing	Homo sapiens Rattus norvegicus	18	BIGWIG BW	Ya-Lin Lu	May 25, 2021
GSE163620	The conservation and divergence of epigenitic reprogramming during mammalian early development	Expression profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Bos taurus Mus musculus Rattus norvegicus Sus scrofa	188	BW TXT SRA Run Selector	Wei Xie	Nov 26, 2021
GSE167257	Neuronal Enhancers are Hotspots for DNA Single-Strand Break Repair [SAR-seq]	Other	Homo sapiens Mus musculus Rattus norvegicus	67	BED BW SRA Run Selector	Wei Wu	Mar 25, 2021
GSE167259	Neuronal Enhancers are Hotspots for DNA Single-Strand Break Repair	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus Rattus norvegicus	109	BED BW	Wei Wu	Mar 25, 2021
GSE178673	Chromatin landscape in perinatal cardiomyocytes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus Rattus norvegicus	28	BED BW GTF HIC SRA Run Selector	Zhang Jing	Feb 03, 2023
GSE190893	Synthetic genomic reconstitution reveals principles of mammalian Hox cluster regulation [DNA-Seq]	Other	Mus musculus Rattus norvegicus	20	BW	Sudarshan Pinglay	Dec 16, 2021
GSE190906	Synthetic genomic reconstitution reveals principles of mammalian Hox cluster regulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus Rattus norvegicus	162	BW	Sudarshan Pinglay	Dec 16, 2021
GSE197926	TAD Evolutionary and functional characterization reveals diversity in mammalian TAD boundary properties and function	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Hylobates moloch Macaca mulatta Mus caroli Mus musculus Mus pahari Nomascus leucogenys Rattus norvegicus	85	BED BEDGRAPH BIGWIG BW COOL XLSX	Mariam Okhovat	Oct 20, 2023
GSE198250	High depth profiling of miRNA targets with chimeric eCLIP [eCLIPseq]	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus Rattus norvegicus	188	BED BW TSV	Gene Yeo	Jul 30, 2022
GSE198251	High depth profiling of miRNA targets with chimeric eCLIP	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus Rattus norvegicus	204	BED BW TSV	Gene Yeo	Jul 29, 2022
GSE226502	Epigenetic evolution of the Ly49 gene family	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus Rattus norvegicus	65	BEDGRAPH BW CSV FA HIC TXT	Changxu Fan	Apr 20, 2024
GSE232956	Small-molecule-induced epigenetic rejuvenation overcomes myelinogenic barriers and stimulates myelin repair	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus Rattus norvegicus	21	BW TXT WIG	XUEZHAO LIU	May 24, 2024
GSE232963	Transcription factor NFYa controls cardiomyocyte metabolism and proliferation during fetal heart development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus Rattus norvegicus	12	BW H5 PNG	Miao Cui	Oct 13, 2023
GSE248444	RNA helicase DDX5 maintains cardiac function by regulating CamkIIδ alternative splicing [RIP-seq]	Other	Rattus norvegicus	8	BW	Kangni Jia	Dec 02, 2024