GEO Browser - GEO

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78 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other	Mus musculus		XLS
GSE38497	Muscleblind-Like 2 mediated alternative splicing in the developing bain by mRNA sequencing	Expression profiling by high throughput sequencing Other	Mus musculus	9	BED BEDGRAPH PDF XLS SRA Run Selector	Ranjan Batra	Aug 16, 2012
GSE46207	Impairment of Muscle Regeneration in Muscleblind-like 3 Isoform Knockout Mice	Expression profiling by high throughput sequencing Other	Mus musculus	15	BED BEDGRAPH TXT XLS SRA Run Selector	Ranjan Batra	May 18, 2013
GSE59779	Studies of regulation of mouse X inactivation and genes escaping XCI	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus Mus musculus x Mus spretus	70	BED BIGWIG GFF PAIR TXT XLS	Xinxian Deng	Feb 20, 2015
GSE65491	Regulatory RNA Apela Is a Component of a Negative Feedback Loop Regulating p53-Mediated Apoptosis in Embryonic Stem Cells	Expression profiling by high throughput sequencing Expression profiling by array Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	31	BED CEL TXT XLS	Jing Huang	Jun 05, 2015
GSE67516	A comprehensive Xist interactome reveals cohesin repulsion and an RNA-directed chromosome conformation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	42	BED BW TXT XLS XLSX SRA Run Selector	John Edward Froberg	Jun 19, 2015
GSE116649	Megadomains and superloops form dynamically during X-chromosome inactivation but are dispensable for silencing and escape	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	65	BED BEDGRAPH BW HIC XLS XLSX SRA Run Selector	John Edward Froberg	Oct 31, 2018
GSE125129	The ChAHP complex counteracts chromatin looping at Ctcf sites that have emerged from recent SINE expansions	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	77	BED BW TXT WIG XLS SRA Run Selector	Fabio Mohn	Sep 05, 2019
GSE126477	Genome-wide characterisation of replication and transcription changed induced by G4-stabilisation with PhenDC3	Expression profiling by high throughput sequencing Other	Mus musculus	13	BED BW TXT XLS SRA Run Selector	Marcel Mechali	Jun 01, 2019
GSE131316	m6A-Label-seq directly reports m6A methylome at base resolution	Methylation profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	17	BED TXT XLS XLSX SRA Run Selector	Jie Cao	Apr 21, 2020
GSE139420	In situ capture of global transcription dynamics and enhancer activity with high accuracy and sensitivity	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	78	BED BIGWIG XLS SRA Run Selector	Ruitu Lyu	Feb 15, 2020
GSE167579	Comparative 3D Genome Architecture in Vertebrates (Hi-C)	Other	Bos taurus Canis lupus familiaris Danio rerio Felis catus Gallus gallus Homo sapiens Macaca mulatta Mus musculus Oryctolagus cuniculus Ovis aries Rattus norvegicus	25	BED HDF5 XLS SRA Run Selector	Mengnan He	Apr 12, 2022
GSE167581	Comparative 3D Genome Architecture in Vertebrates	Expression profiling by high throughput sequencing Other	Bos taurus Canis lupus familiaris Danio rerio Felis catus Gallus gallus Homo sapiens Macaca mulatta Mus musculus Oryctolagus cuniculus Ovis aries Rattus norvegicus Sus scrofa	54	BED HDF5 XLS	Mengnan He	Apr 12, 2022
GSE199968	Comparative 3D Genome Architectures of Adipose Tissues Provide Insight into Human-specific Regulation of Metabolic Homeostasis	Other Expression profiling by high throughput sequencing	Mus musculus Ovis aries	20	BED HIC TXT XLS	jin long	Apr 25, 2023
GSE206694	RNA Polymerase II transcription independent of TBP (CUT&Tag)	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	83	BED BW TXT XLS XLSX	Sheila Teves	Apr 12, 2023
GSE84157	Major MLL fusion partners regulate promoter-proximal pausing and release of RNA polymerase II	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	49	BEDGRAPH TXT XLS XLSX SRA Run Selector	Gang Wei	Jun 30, 2021
GSE150254	Mechanism of REST/NRSF Regulation of Clustered Protocadherin Alpha Genes	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	95	BEDGRAPH TXT XLS SRA Run Selector	Yuanxiao Tang	Apr 14, 2021
GSE151906	Loop Extrusion Mediates Physiological Locus Contraction for V(D)J Recombination (LAM-HTGTS)	Other	Mus musculus	48	BEDGRAPH TXT XLS SRA Run Selector	Frederick W Alt	Nov 08, 2020
GSE151910	Loop Extrusion Mediates Physiological Locus Contraction for V(D)J Recombination	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	138	BEDGRAPH BW TXT XLS	Frederick W Alt	Nov 07, 2020
GSE222183	Combinatorial transcription factor binding encodes cis-regulatory wiring of forebrain GABAergic neurogenesis	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	11	BEDPE XLS	Alex S. Nord	Sep 11, 2023
GSE148321	Dietary palmitic acid promotes a prometastatic epigenetic memory related to tumor innervation	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	1134	BROADPEAK BW CEL MTX TSV XLS ZIP	Antoni Berenguer-LLergo	Nov 16, 2021