GEO Browser - GEO

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120 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other	Mus musculus		TAR
GSE48763	Cohesin-based chromatin interactions enable regulated gene expression within pre-existing architectural compartments.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	13	BED TAR TXT SRA Run Selector	Andre J Faure	Aug 13, 2013
GSE96033	Genome-wide Mapping of Lamin B1 Reveals the Existence of Dynamic and Functional Euchromatin Lamin B1 Domains (eLADs) at the onset of the Epithelial to Mesenchymal Transition	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	27	BED BEDGRAPH TAR TXT SRA Run Selector	Enrique Blanco	Aug 30, 2018
GSE155677	Multimodal profiling of the transcriptional regulatory landscape of the developing mouse cortex identifies Neurog2 as a key epigenome remodeler	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Escherichia coli Mus musculus	36	BED BEDGRAPH BW FA MTX PICKLE TAR TSV TXT SRA Run Selector	Boyan Bonev	Jan 27, 2022
GSE159468	Hijacking of transcriptional condensates by endogenous retroviruses	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	78	BED BW HIC TAR TSV SRA Run Selector	Sara Hetzel	Mar 30, 2022
GSE161570	KMT2C Loss Promotes Small Cell Lung Cancer Metastasis through DNMT3A-mediated Epigenetic Reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	55	BED BW CGMAP CSV GAPPEDPEAK TAR XLSX SRA Run Selector	Xaingyu Pan	Feb 23, 2022
GSE174554	A single cell atlas of human glioma under therapy	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	113	BED MTX TAR TSV TXT ZIP	Aaron Diaz	Jul 05, 2022
GSE212482	Multiomic analysis reveals conservation of cancer associated fibroblast phenotypes across species and tissue of origin	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	26	BED MTX TAR TSV	Michael Januszyk	Oct 21, 2022
GSE218274	PAX3-FOXO1 expression in endothelial progenitors dictates myogenic reprogramming and rhabdomyosarcoma identity	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	75	BED BW HIC TAR TDF TXT	Hongjian Jin	Sep 29, 2023
GSE231869	Modulation of CTCF barrier permeability by ZFP661 enhances protocadherin diversity for proper cortical dendritic projection in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	90	BED BW NARROWPEAK TAR TXT	Jinpu Jin	May 09, 2023
GSE101717	A TAD boundary at the HoxD locus segregates opposing limb regulatory landscapes and their target genes	Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	91	BEDGRAPH MATRIX NARROWPEAK TAR TXT	Eddie Rodríguez-Carballo	Dec 22, 2017
GSE134529	CRISPR/Cas9/AAV9-sgRNA Mediated In Vivo Genome Editing Reveals the Indispensability of Myc During Muscle Stem Cells Activation by Remodeling the 3D Chromatin	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	51	BEDGRAPH FPKM_TRACKING TAR ZIP	Yingzhe Ding	Sep 16, 2021
GSE207997	Analysis of Polycomb Repressive Complex 1 subunits across cell cycle in pluripotent cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	53	BEDGRAPH BIGWIG TAR	Jordi Martorell-Marugan	Dec 02, 2022
GSE84795	Characterization of hundreds of regulatory landscapes in developing limbs reveals two regimes of chromatin folding	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	114	BW TAR	Guillaume Andrey	Dec 06, 2016
GSE96107	Multi-scale 3D genome rewiring during mouse neural development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	92	BW NARROWPEAK TAR TXT SRA Run Selector	Boyan Bonev	Oct 18, 2017
GSE99607	Impaired DNA demethylation of C/EBP sites causes premature aging	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Expression profiling by array Other	Mus musculus	58	BW TAR TSV TXT	Emil Karaulanov	Jun 11, 2018
GSE165495	Mesomelic Dysplasias Associated With The HOXD Locus Are Caused By Regulatory Reallocations	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing Third-party reanalysis	Mus musculus	23	BW COOL NARROWPEAK TAR TXT	Lucille Lopez-Delisle	Jul 20, 2021
GSE211214	Identifying gene combinations for targeting innate immune cells to enhance T cells activation	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	81	BW NARROWPEAK TAR	Oren Parnas	Sep 13, 2023
GSE272483	CTCF-dependent insulation of Hoxb13 and the heterochronic control of tail length	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Third-party reanalysis	Mus musculus	54	BW NARROWPEAK TAR	Lucille Lopez-Delisle	Jul 18, 2024
GSE226376	The Triptryium wilfordii derivative celastrol has anti-fibrotic effects in systemic sclerosis	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	24	CLOUPE CSV H5 JPG JSON MTX PNG TAR TSV	Andrew Leask	Nov 01, 2023
GSE226760	The Triptryium wilfordii derivative celastrol has anti-fibrotic effects in systemic sclerosis [Spatial Transcriptomics]	Other	Mus musculus	8	CLOUPE CSV H5 JPG JSON MTX PNG R TAR TSV	Andrew Leask	Nov 01, 2023