GEO Browser - GEO

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338 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other	Mus musculus		MTX
GSE87064	The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	868	BED BW MTX TSV TXT	Beisi Xu	May 03, 2017
GSE99151	Global organization of the B cell genome by the transcription factor Pax5 [Hi-C]	Other	Mus musculus	30	BED MTX SRA Run Selector	Rhys Allan	Oct 07, 2018
GSE105918	In situ Hi-C profiles of mouse CD4+ T cells, CD8+ T cells and B cells	Other	Mus musculus	6	BED MTX SRA Run Selector	Gordon K Smyth	May 31, 2018
GSE133246	Hi-C profiling of B-cell progenitors from Erg KO and WT mice	Other	Mus musculus	6	BED MTX SRA Run Selector	Gordon K Smyth	Apr 14, 2020
GSE155677	Multimodal profiling of the transcriptional regulatory landscape of the developing mouse cortex identifies Neurog2 as a key epigenome remodeler	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Escherichia coli Mus musculus	36	BED BEDGRAPH BW FA MTX PICKLE TAR TSV TXT SRA Run Selector	Boyan Bonev	Jan 27, 2022
GSE155882	A Transcriptional Switch Governs Fibroblast Activation in Heart Disease	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	56	BED BIGWIG BW CSV MTX TSV WIG SRA Run Selector	Pawel Przytycki	Apr 08, 2021
GSE156294	in situ Hi-C profiles of DP thymocyltes from control and Suv39h1/Suv39h2 double knockout mice	Other	Mus musculus	4	BED MTX SRA Run Selector	Gordon K Smyth	Mar 27, 2024
GSE161676	Identifying non-genetic determinants of malignant clonal fitness at single cell resolution	Expression profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus synthetic construct	271	BED MTX SEG TSV VCF	Mark Dawson	Nov 08, 2021
GSE165049	HOTTIP reinforces CTCF-defined TAD boundaries by forming R-loops to drive Wnt/b-catenin target gene expression in AML leukemogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	51	BED H5 MTX TSV TXT SRA Run Selector	Suming Huang	Feb 18, 2022
GSE174554	A single cell atlas of human glioma under therapy	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	113	BED MTX TAR TSV TXT ZIP	Aaron Diaz	Jul 05, 2022
GSE178758	Integrated spatial multi-omics reveals fibroblast fate during tissue repair	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	34	BED CSV H5 JSON MTX PNG TSV SRA Run Selector	Michael Januszyk	Jun 24, 2021
GSE181236	Xist-seeded nucleation sites form local concentration gradients of silencing proteins to inactivate the X-chromosome	Other Expression profiling by high throughput sequencing	Mus musculus Mus musculus musculus x Mus musculus castaneus	47	BED BEDGRAPH MTX TSV	Kathrin Plath	Oct 26, 2021
GSE185737	Reorganization of postmitotic neuronal chromatin accessibility for maturation of serotonergic identity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	55	BED BW CSV MTX TSV SRA Run Selector	Evan Deneris	Apr 14, 2022
GSE188525	A critical requirement for IκBα in controlling dormancy in Hematopoietic stem cells via retinoic acid during embryonic development	Expression profiling by high throughput sequencing Other	Mus musculus	20	BED BW MTX TSV	Anna Bigas	Apr 15, 2024
GSE198564	An Epigenetic Memory of Inflammation Induces Context-Dependent Lineage Plasticity in the Pancreas with Divergent Phenotypic Outcomes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	115	BED BIGWIG BW H5 MTX TSV TXT	Rohit Chandwani	Oct 24, 2023
GSE198730	Transcriptomics, Regulatory Syntax, and Enhancer Identification in Heterogenous Populations of Mesoderm-Induced ESCs at Single-Cell Resolution	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	39	BED CSV H5 HIC MTX TBI TSV XLSX	Vittorio Sartorelli	Jul 31, 2022
GSE208742	Direct neuronal reprogramming of mouse astrocytes is associated with multiscale epigenome remodeling and requires Yy1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	64	BED BEDGRAPH BW MTX NARROWPEAK TAB TSV TXT XLSX SRA Run Selector	Boyan Bonev	Apr 30, 2024
GSE212482	Multiomic analysis reveals conservation of cancer associated fibroblast phenotypes across species and tissue of origin	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	26	BED MTX TAR TSV	Michael Januszyk	Oct 21, 2022
GSE213597	ETV6 Represses Inflammatory Response Genes and Regulates HSPC Function During Stress Hematopoiesis in Mice	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	27	BED BW HIC MTX TBI TSV	Kim Nichols	Aug 24, 2023
GSE214116	Enhanced STAT5a activation opposes Tox and rewires exhausted CD8 T cells towards a hybrid durable effector-like state during chronic stimulation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	62	BED BW MTX TSV	E JOHN WHERRY	May 31, 2023