GEO Browser - GEO

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37 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other	Mus musculus		BROADPEAK
GSE234699	SMYD5 is a regulator of the mild hypothermia response	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	127	BEDGRAPH BROADPEAK BW H5	Hans Tomas Bjornsson	Jul 26, 2024
GSE265888	Dynamic Chromatin Boundaries of TCR Loci Coincide V(D)J recombination During T Cell Development	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	79	BED BEDGRAPH BEDPE BROADPEAK BW CSV HIC MATRIX TXT	Hao bingtao	Apr 27, 2024
GSE262006	Temporal constraints on enhancer usage shape the regulation of limb gene transcription	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	123	BROADPEAK BW H5 TXT	Guillaume Andrey	Mar 22, 2024
GSE214264	3D genome structures of single differentiating mouse ES cells reveal a unique reorganisation of chromatin in the formative state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	101	BROADPEAK BW CSV NARROWPEAK NCC TSV TXT	David Lando	Jan 19, 2024
GSE241440	XIST directly regulates X-linked and autosomal genes in naïve human pluripotent cells [RAP-seq_mouse]	Other	Mus musculus	11	BEDGRAPH BROADPEAK	Kathrin Plath	Dec 15, 2023
GSE241444	XIST directly regulates X-linked and autosomal genes in naïve human pluripotent cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	129	BEDGRAPH BROADPEAK	Kathrin Plath	Dec 13, 2023
GSE224489	Epigenetic data during proliferation and differentiation of C2C12 cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	28	BED BEDPE BIGWIG BROADPEAK BW TXT	Mingyang Hu	Feb 10, 2023
GSE212438	Bidirectional changes in postmitotic H3K27me3 distributions underlie cerebellar granule neuron maturation dynamics	Other	Mus musculus	24	BROADPEAK	Anne E West	Oct 11, 2022
GSE212441	Bidirectional changes in postmitotic H3K27me3 distributions underlie cerebellar granule neuron maturation dynamics	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	54	BROADPEAK TXT	Anne E West	Oct 11, 2022
GSE210181	Probing cell identity hierarchies by fate titration and collision during direct reprogramming [Cut & Tag]	Other	Mus musculus	8	BIGWIG BROADPEAK TSV TXT	Bob Hersbach	Sep 16, 2022
GSE211864	Probing cell identity hierarchies by fate titration and collision during direct reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	16	BED BIGWIG BROADPEAK H5 LOOM TSV	Bob Hersbach	Sep 16, 2022
GSE212252	Balanced SET levels favor the correct enhancer repertoire during cell fate acquisition	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Danio rerio Homo sapiens Mus musculus	80	BROADPEAK HIC NARROWPEAK TAB	Luca Massimino	Sep 12, 2022
GSE199059	Chromatin jets define the properties of cohesin-driven in vivo loop extrusion	Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	15	BEDGRAPH BROADPEAK HIC NARROWPEAK	Ya Guo	Aug 15, 2022
GSE166074	A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis [Cut&Run IFNgvsCtr]	Other	Mus musculus	21	BROADPEAK NARROWPEAK WIG SRA Run Selector	Eneritz Agirre	Jan 28, 2022
GSE166075	A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis [Cut&Run EZH2i]	Other	Mus musculus	24	BROADPEAK WIG SRA Run Selector	Eneritz Agirre	Jan 28, 2022
GSE171749	SETDB1/NSD dependent H3K9me3/H3K36me3 dual heterochromatin maintains gene expression profiles by bookmarking poised enhancers	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	88	BED BROADPEAK BW HIC TXT SRA Run Selector	Amandine BARRAL	Jan 25, 2022
GSE184498	Co-existing TP53 and ARID1A mutations promote aggressive endometrial tumorigenesis [CUT&RUN]	Other	Mus musculus	4	BROADPEAK SRA Run Selector	Ronald L. Chandler	Dec 13, 2021
GSE184499	Co-existing TP53 and ARID1A mutations promote aggressive endometrial tumorigenesis	Expression profiling by high throughput sequencing Other	Mus musculus	10	BROADPEAK TAB	Ronald L. Chandler	Dec 13, 2021
GSE148321	Dietary palmitic acid promotes a prometastatic epigenetic memory related to tumor innervation	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	1134	BROADPEAK BW CEL MTX TSV XLS ZIP	Antoni Berenguer-LLergo	Nov 16, 2021
GSE161596	Deletion of the helicase RTEL1 in RNA:DNA hybrids throughout the genome and how this may be affected by overexpression of the protein WT RNaseH1GFP in MEFs	Other	Mus musculus	8	BIGWIG BROADPEAK SRA Run Selector	Simon J Boulton	Jan 04, 2021