GEO Browser - GEO

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37 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Other	Mus musculus		BEDPE
GSE131580	Combined Cohesin-Runx1 Deficiency Synergistically Perturbs Chromatin Looping and Causes Myelodysplastic Syndromes [Hi-C]	Other	Homo sapiens Mus musculus	16	BEDPE SRA Run Selector	Yotaro Ochi	Apr 07, 2020
GSE137274	A WIZ/Cohesin/CTCF complex anchors DNA loops to define gene expression and cell identity [Hi-C]	Other	Mus musculus	4	BEDPE HIC TXT SRA Run Selector	Jill Dowen	Apr 14, 2020
GSE152573	RUNX1 and CBFβ-SMMHC transactivate target genes together in abnormal myeloid progenitors for leukemogenesis	Expression profiling by high throughput sequencing Other	Mus musculus	33	BEDPE DIFF H5 TXT SRA Run Selector	Tao Zhen	Oct 06, 2020
GSE153574	A cohesin cancer mutation reveals a role for the hinge domain in genome organization and gene expression [Hi-C]	Other	Mus musculus	4	BEDPE HIC SRA Run Selector	Zachary Carico	Feb 23, 2021
GSE160943	Oct1 cooperates with Smad transcription factors to promote mesodermal lineage specification	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	32	BED BEDGRAPH BEDPE BW	Dean Tantin	Nov 26, 2022
GSE166177	A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis [HiChIP]	Other	Mus musculus	6	BEDPE HIC TXT SRA Run Selector	Eneritz Agirre	Jan 28, 2022
GSE169120	3D chromatin topography of LSK cells with hyperactivated Notch1 and/or Tcf7 knock-out [HiC-seq]	Other	Mus musculus	6	BEDPE HIC SRA Run Selector	Nadine Fournier	Jan 21, 2022
GSE169121	Tcf1 is essential for initiation of oncogenic Notch1-driven chromatin topology.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	61	BEDGRAPH BEDPE HIC TXT	Nadine Fournier	Jan 21, 2022
GSE180175	Hi-TrAC reveals fine-scale chromatin structures organized by transcription factors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	136	BEDPE BW TXT SRA Run Selector	Yaqiang Cao	Oct 02, 2022
GSE183556	MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	550	BEDPE TXT	Asifa Akhtar	Aug 10, 2023
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	244	BED BEDPE BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE186893	STAG2 promotes the myelination transcriptional program in oligodendrocytes [Hi-C]	Other	Mus musculus	4	BEDGRAPH BEDPE HIC MCOOL SRA Run Selector	Hongtao Yu	Aug 23, 2022
GSE194068	KLF4 inhibits early neural differentiation of ESCs by coordinating specific 3D chromatin structure	Expression profiling by high throughput sequencing Other	Mus musculus	8	BEDPE TXT	Niannian Li	Jun 01, 2022
GSE197024	Epigenetic modules governing skin epidermal homeostasis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	46	BED BEDPE HIC TXT	Stephen R Brooks	Jan 13, 2023
GSE200114	Dynamic promoter-enhancer contacts contribute to spatiotemporal gene expression during mouse fetal development	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	70	BEDPE BIGWIG HIC NARROWPEAK	Ming Hu	Sep 02, 2024
GSE204946	Restraint of IFN-γ expression through a distal silencer CNS–28 for tissue homeostasis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	92	BEDPE BW TXT	Yaqiang Cao	Mar 01, 2023
GSE206556	Epigenetic modules governing skin epidermal homeostasis [III]	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	22	BED BEDPE HIC TXT	Mariana Kaplan	Jan 12, 2023
GSE207801	Nuclear condensates of YAP fusion proteins as a critical driver for ependymoma	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	4	BEDPE	Zaili Luo	Oct 27, 2022
GSE207828	Oct1 cooperates with Smad transcription factors to promote mesodermal lineage specification [HiChIP]	Other	Mus musculus	4	BEDPE	Dean Tantin	Nov 26, 2022
GSE208106	Genomics of sexual cell fate transdifferentiation in the mouse gonad	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	51	BEDPE BIGWIG CSV	Micah Gearhart	Sep 30, 2022