GEO Browser - GEO

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40 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Other	Mus musculus		WIG
GSE155882	A Transcriptional Switch Governs Fibroblast Activation in Heart Disease	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	56	BED BIGWIG BW CSV MTX TSV WIG SRA Run Selector	Pawel Przytycki	Apr 08, 2021
GSE166179	A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	1185	CSV H5 SF WIG	Eneritz Agirre	May 21, 2021
GSE203049	AGO2 silences mobile transposons in the nucleus of quiescent cells	Genome binding/occupancy profiling by high throughput sequencing Other Non-coding RNA profiling by high throughput sequencing	Mus Mus musculus	32	BW WIG	Joana A Vidigal	Jul 18, 2022
GSE129067	An enhancer cluster controls gene activity and topology of the SCN5A-SCN10A locus in vivo	Expression profiling by high throughput sequencing Other	Mus musculus	24	WIG	Vincent M. Christoffels	Oct 04, 2019
GSE129062	An enhancer cluster controls gene activity and topology of the SCN5A-SCN10A locus in vivo (Hi-C)	Other	Mus musculus	18	WIG SRA Run Selector	Vincent M. Christoffels	Oct 04, 2019
GSE139117	Analysis of CRE-mediated chromatin interactions by CAPTURE2.0	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	105	BED BW WIG	Jian Xu	Feb 20, 2020
GSE72720	CTCF binding polarity determines chromatin looping	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	506	BED WIG	Elzo de Wit	Oct 29, 2015
GSE72539	CTCF binding polarity determines chromatin looping [4C]	Other	Mus musculus	504	WIG SRA Run Selector	Elzo de Wit	Oct 29, 2015
GSE76174	Cause and consequence of tethering a sub-TAD to different nuclear compartments	Other	Mus musculus	45	WIG SRA Run Selector	Geert Geeven	Dec 19, 2015
GSE84899	Cdx and T Brachyury co-activate growth signaling in the embryonic axial progenitor niche.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	55	BED BW CSV WIG SRA Run Selector	Jacqueline Deschamps	Dec 20, 2016
GSE91046	Cdx is crucial for the timing mechanism driving collinear Hox activation and defines a trunk segment in the Hox cluster topology	Other	Mus musculus	3	WIG SRA Run Selector	Jacqueline Deschamps	Jan 31, 2017
GSE129707	Dinucleotide regulation by REXO2 maintains promoter specificity in mammalian mitochondria	Expression profiling by high throughput sequencing Other	Mus musculus	12	TXT WIG SRA Run Selector	Stefan J Siira	Oct 03, 2019
GSE78800	Dissection of a super-enhancer in vivo (ATAC-seq)	Other	Mus musculus	19	WIG SRA Run Selector	Jim Hughes	Jun 02, 2016
GSE60738	Dynamics of gene silencing during X inactivation using allele-specific RNA-Seq	Expression profiling by high throughput sequencing Other	Mus musculus	20	BED TXT WIG SRA Run Selector	Hendrik Marks	Jun 15, 2015
GSE80154	Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	144	BEDGRAPH CEL WIG	James Bradner	Jan 29, 2018
GSE187007	G4access identifies G-quadruplexes and their associations with open chromatin and imprinting control regions. Nat Genet (2023). https://doi.org/10.1038/s41588-023-01437-4	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens Mus musculus Saccharomyces cerevisiae	63	BED WIG SRA Run Selector	Amal Makrini	Apr 14, 2023
GSE193825	Gene silencing dynamics are modulated by transiently active regulatory elements	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	117	BW WIG	Marit W. Vermunt	Feb 14, 2023
GSE193718	Gene silencing dynamics are modulated by transiently active regulatory elements [4C-seq]	Other	Mus musculus	26	WIG	Marit W. Vermunt	Feb 14, 2023
GSE78835	Genetic dissection of the α-globin super-enhancer	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	36	WIG	Jim Hughes	Jun 02, 2016
GSE195823	Identification of a LncRNA EPR—>METTL7A1 pathway modulating translation of select genes	Expression profiling by high throughput sequencing Other	Mus musculus	20	BW WIG	gabriele bucci	May 28, 2022