GEO Browser - GEO

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420 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Other	Mus musculus		TXT
GSE71218	How C/EBPa creates an elite cell state for reprogramming to pluripotency	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	68	BW TXT	samuel Collombet	Feb 19, 2016
GSE76481	Cell-of-origin specific 3D genome structure acquired during somatic cell reprogramming	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	85	NARROWPEAK TXT	Elzo de Wit	Mar 01, 2016
GSE89012	Nat1 promotes translation of specific proteins that induce differentiation of mouse embryonic stem cells	Expression profiling by array Expression profiling by high throughput sequencing Other	Mus musculus	28	TXT	Shinya Yamanaka	Jan 06, 2017
GSE89033	Post-transcriptional Gene Silencing Mediated by microRNAs is Controlled by Nucleoplasmic Sfpq	Expression profiling by array Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Mus musculus	46	TXT	Silvia Bottini	Oct 20, 2017
GSE90034	Srf destabilizes cell identity	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	41	BEDGRAPH BW CEL TXT	Takashi Ikeda	Apr 18, 2018
GSE99607	Impaired DNA demethylation of C/EBP sites causes premature aging	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	58	BW TAR TSV TXT	Emil Karaulanov	Jun 11, 2018
GSE128186	MeCP2 represses the rate of transcriptional initiation of highly methylated long genes	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	400	RCC TXT	Lisa D. Boxer	Nov 26, 2019
GSE60738	Dynamics of gene silencing during X inactivation using allele-specific RNA-Seq	Expression profiling by high throughput sequencing Other	Mus musculus	20	BED TXT WIG SRA Run Selector	Hendrik Marks	Jun 15, 2015
GSE63472	Drop-Seq analysis of P14 mouse retina single-cell suspension	Expression profiling by high throughput sequencing Other	Mus musculus	7	BAM TXT SRA Run Selector	Evan Macosko	May 20, 2015
GSE63473	Highly parallel genome-wide expression profiling of individual cells using nanoliter droplets	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus synthetic construct	203	BAM FASTA GTF TXT	Evan Macosko	May 20, 2015
GSE67955	The landscape of global-long range interactions in mouse and human blood cell lines mediated by Yy1, GATA1, and CTCF during differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	18	BED TXT SRA Run Selector	Marissa Macchietto	Apr 30, 2019
GSE68582	Local Genome Topology Can Exhibit an Incompletely Rewired 3D-Folding State During Somatic Cell Reprogramming	Expression profiling by high throughput sequencing Other	Mus musculus	20	BED TXT SRA Run Selector	Jennifer E Phillips-Cremins	May 05, 2016
GSE72164	Dynamic reorganization of extremely long-range promoter-promoter interactions between two states of pluripotency	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	76	BEDGRAPH BEDPE BW TXT SRA Run Selector	Shuang-Yin Wang	Dec 07, 2015
GSE73357	Heterogeneous ribosomes exist and selectively translate distinct subpools of mRNAs in stem cells	Expression profiling by high throughput sequencing Other	Mus musculus	20	TXT SRA Run Selector	Zhen Shi	Jun 15, 2017
GSE76248	MiCEE: a ncRNA-protein complex mediates epigenetic silencing and nucleolus organization	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Mus musculus	12	BED BEDGRAPH TXT SRA Run Selector	Guillermo Barreto	Apr 06, 2018
GSE77328	OmoMYC blunts promoter invasion by oncogenic MYC to inhibit gene expression characteristic of MYC-dependent tumors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	44	TXT WIG SRA Run Selector	Martin Eilers	Oct 18, 2016
GSE78163	Ligation-Free Ribosome Profiling Reveals Cell Type-Specific Regulation of Protein Synthesis in the Brain	Expression profiling by high throughput sequencing Other	Mus musculus	12	TXT SRA Run Selector	Peter Sims	Jun 07, 2016
GSE78708	Not All H3K4 methylations are Created Equal: Mll2/COMPASS Dependency in Primordial Germ Cell Specification	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	90	BW TXT XLS SRA Run Selector	Ali Shilatifard	Feb 02, 2017
GSE80483	A multi-step transcriptional and chromatin cascade underlies motor neuron programming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	887	BW TXT	Shaun Mahony	Dec 07, 2016
GSE83394	Dynamic Reorganization of Chromatin Accessibility Signatures during Dedifferentiation of Secretory Precursors into Lgr5+ Intestinal Stem Cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	49	BW TXT SRA Run Selector	Ramesh Shivdasani	Jun 01, 2017