405 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
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GSE135498
Sequencing short capped RNAs captures acute transcription initiation and identifies promoter and distal regulatory elements across eukaryotes from total RNA
  • Other
40 Christopher Benner Sep 16, 2019
GSE199431
Position-dependent function of human sequence-specific transcription factors
56 Christopher Benner Apr 26, 2024
GSE202949
Measuring stress response upon tissue dissociation using SLAMseq in bulk and single cells
30 Anika Neuschulz Dec 20, 2022
GSE250267
EVOLUTIONARY CO-OPTION OF AN ANCESTRAL CLOACAL REGULATORY LANDSCAPE WITH THE EMERGENCE OF DIGITS AND GENITALS
34 Aurelie Hintermann Apr 17, 2024
GSE110061
Direct DNA crosslinking with CAP-C uncovers transcription-dependent chromatin organization at high resolution
76 Youzhi Cheng Aug 22, 2020
GSE151112
Asterix/Gtsf1 links tRNAs and piRNA silencing of retrotransposons
  • Other
24 Jonathan James Ipsaro Feb 20, 2021
GSE185930
Distinct roles of CKM-Mediator in controlling Polycomb-dependent chromosomal interactions and priming genes for induction
148
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Emilia Dimitrova May 23, 2022
GSE120240
Massively Parallel Reporter Assay for pluripotency factors in mESCs
8 Dana M King Sep 18, 2019
GSE165812
Information Content Differentiates Enhancers From Silencers in Mouse Photoreceptors
  • Other
16 Michael Aaron White Jan 30, 2021
GSE195592
Developmental and evolutionary comparative analysis of a HoxD regulatory landscape in mammals and birds
46 Aurelie Hintermann Jun 20, 2022
GSE111930
An endogenous retrovirus-derived long non-coding RNA promotes fetal cardiomyocyte migration in primates
60 Lei Tian Aug 11, 2020
GSE63473
Highly parallel genome-wide expression profiling of individual cells using nanoliter droplets
203 Evan Macosko May 20, 2015
GSE74353
RNA duplex map in living cells reveals higher order transcriptome structure
  • Other
14 Zhipeng Lu Apr 04, 2016
GSE77328
OmoMYC blunts promoter invasion by oncogenic MYC to inhibit gene expression characteristic of MYC-dependent tumors
44 Martin Eilers Oct 18, 2016
GSE77553
Capturing pairwise and multi-way chromosomal conformations using C-walks
  • Other
20 Pedro Olivares-Chauvet Feb 04, 2016
GSE95374
Selective silencing of euchromatic L1s revealed by genome-wide screens for L1 regulators
104 Nian Liu Dec 06, 2017
GSE98119
The energetics and physiological impact of cohesin extrusion
352 Seolkyoung Jung May 01, 2018
GSE99174
CAPTURE-3C-seq analysis of cis-element-mediated long-range DNA interactions
  • Other
75 Jian Xu Aug 24, 2017
GSE100733
LRPPRC-mediated folding of the mitochondrial transcriptome
28 Stefan J Siira Nov 21, 2017
GSE111134
A compendium of conserved cleavage and polyadenylation events in mammalian genes
  • Other
128 Bin Tian Aug 08, 2018