GEO Browser - GEO

Series

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DataSets

46 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Other	Mus musculus		NARROWPEAK
GSE80511	A multi-step transcriptional and chromatin cascade underlies motor neuron programming (ATAC-Seq)	Other	Mus musculus	4	BW NARROWPEAK SRA Run Selector	Shaun Mahony	Dec 07, 2016
GSE110897	Targeting enhancer switching overcomes non-genetic drug resistance in acute myeloid leukaemia [Click-seq]	Other	Mus musculus	5	NARROWPEAK SRA Run Selector	Mark Dawson	May 21, 2019
GSE243851	Nuclear Organization of Lens Epithelium and Fiber Cells in Newborn Lens	Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED BEDGRAPH BEDPE BW HIC NARROWPEAK	William Chang	Oct 16, 2023
GSE78873	A long noncoding RNA lincRNA-EPS acts as a transcriptional brake to restrain inflammation	Other	Mus musculus	12	NARROWPEAK SRA Run Selector	Howard Chang	May 08, 2016
GSE150388	ATACseq, CutnRun and RNAseq data from Merkel cell and Touch dome epithelial progenitor cells, from wild type and Pou4f3-mutant epidermis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	14	NARROWPEAK TXT SRA Run Selector	Neil Segil	Jul 09, 2021
GSE85185	YY1 and CTCF Orchestrate a 3D Chromatin Looping Switch during Early Neural Lineage Commitment	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	16	BED NARROWPEAK TXT SRA Run Selector	Jennifer E Phillips-Cremins	May 22, 2017
GSE150279	Using Mouse Embryonic Fibroblast to test the pioneer factor activity of POU4F3	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	16	NARROWPEAK SRA Run Selector	Neil Segil	Jul 09, 2021
GSE123292	Satb1 integrates DNA sequence, shape, motif density and torsional stress to selectively bind a subset of putative targets in nucleosome-dense regions of the genome	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	20	BROADPEAK BW NARROWPEAK SRA Run Selector	Jan Liphardt	May 28, 2019
GSE165495	Mesomelic Dysplasias Associated With The HOXD Locus Are Caused By Regulatory Reallocations	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing Third-party reanalysis	Mus musculus	23	BW COOL NARROWPEAK TAR TXT	Lucille Lopez-Delisle	Jul 20, 2021
GSE150638	Muscle progenitor specification and myogenic differentiation are associated with changes in chromatin topology.	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	26	BIGWIG NARROWPEAK RDS TXT SRA Run Selector	Nan Zhang	Oct 31, 2020
GSE225972	Proteome-scale tagging and functional screening in mammalian cells by ORFtag	Other Expression profiling by high throughput sequencing	Mus musculus	28	BW NARROWPEAK TXT	Alexander Stark	May 10, 2024
GSE150386	ATACseq, CutnRun and RNAseq data from sensory progenitors and hair cells, from wild type and Pou4f3-mutant cochlea	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	30	NARROWPEAK TXT SRA Run Selector	Neil Segil	Jul 09, 2021
GSE166426	Histone H1 regulates non-coding RNA turnover on chromatin in a m6A-dependent manner	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	32	BED BW NARROWPEAK SRA Run Selector	Maria Gomez	Sep 13, 2022
GSE134798	Nucleosomes protect DNA from irradiation-induced double strand breaks in living cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Homo sapiens Mus musculus	34	BED BEDGRAPH NARROWPEAK	Jose Manuel Garcia-Manteiga	Jul 07, 2020
GSE144716	Gene regulation by gonadal hormone receptors defines brain sex differences-[CUT&RUN]	Other	Homo sapiens Mus musculus	34	BW NARROWPEAK SRA Run Selector	Melody Wu	Apr 20, 2022
GSE194114	Context-dependent enhancer function revealed by targeted inter-TAD relocation	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	34	BED BW COOL NARROWPEAK TXT	Lucille Lopez-Delisle	May 17, 2022
GSE250267	EVOLUTIONARY CO-OPTION OF AN ANCESTRAL CLOACAL REGULATORY LANDSCAPE WITH THE EMERGENCE OF DIGITS AND GENITALS	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Danio rerio Mus musculus	34	BED BW COOL NARROWPEAK TXT	Aurelie Hintermann	Apr 17, 2024
GSE120813	HBO1 is required for the maintenance of leukaemia stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	36	NARROWPEAK	Mark Dawson	Dec 18, 2019
GSE142021	Effect of Ythdf2 in haematopoiesis	Expression profiling by high throughput sequencing Other	Mus musculus	38	NARROWPEAK	Kamil R Kranc	Oct 29, 2020
GSE194018	A role for the GATA transcription factor family in X-chromosome inactivation as direct potent Xist activators	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus Synthetic plasmid	39	BW NARROWPEAK	Till Schwämmle	Jan 26, 2022