GEO Browser - GEO

Series

Samples

Platforms

DataSets

64 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Other	Mus musculus		BIGWIG
GSE135498	Sequencing short capped RNAs captures acute transcription initiation and identifies promoter and distal regulatory elements across eukaryotes from total RNA	Other	Oryza sativa Neurospora crassa Nematostella vectensis Mus musculus Homo sapiens Capsaspora owczarzaki	40	BIGWIG BW TXT SRA Run Selector	Christopher Benner	Sep 16, 2019
GSE75684	RNA binds to a CBP regulatory motif to stimulate histone acetylation and transcription	Other Non-coding RNA profiling by high throughput sequencing	Mus musculus	6	BIGWIG SRA Run Selector	Daniel Bose	Jan 12, 2017
GSE83293	A hyperactive transcriptional state marks genome reactivation at the mitosis-G1 transition	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	77	BEDGRAPH BIGWIG BW	Ross Hardison	Jun 15, 2016
GSE85164	DHX9 suppresses spurious RNA processing defects originating from the Alu invasion of the human genome	Expression profiling by high throughput sequencing Other	Mus musculus Homo sapiens Drosophila melanogaster	90	BED BIGWIG	Asifa Akhtar	Mar 28, 2017
GSE89598	DHX9 suppresses spurious RNA processing defects originating from the Alu invasion of the human genome [XL9 DHX9 FLASH CLIP-seq]	Other	Mus musculus	4	BED BIGWIG GFF SRA Run Selector	Asifa Akhtar	Mar 28, 2017
GSE89751	DHX9 suppresses spurious RNA processing defects originating from the Alu invasion of the human genome [XL8 DHX9 FLASH CLIP-seq]	Other	Mus musculus	4	BED BIGWIG GFF SRA Run Selector	Asifa Akhtar	Mar 28, 2017
GSE92412	Epigenetic modulation of a hardwired 3D chromatin landscape in two naive states of pluripotency.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	194	BEDGRAPH BIGWIG BW	Hendrik G Stunnenberg	Apr 30, 2019
GSE94716	Krox20 hindbrain regulation involves multiple modes of cooperation between cis-acting elements	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	71	BEDGRAPH BIGWIG BW	Pascale Gilardi-Hebenstreit	Jul 18, 2017
GSE95804	The BET protein BRD2 cooperates with CTCF to enforce transcriptional and architectural boundaries	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	12	BIGWIG BROADPEAK	Gerd A Blobel	Mar 31, 2017
GSE98251	Epigenomic Atlas of Early Human Craniofacial Development	Other	Mus musculus	2	BIGBED BIGWIG TXT SRA Run Selector	Justin Cotney	May 09, 2017
GSE100400	Episomal HBV persistence within transcribed host nuclear chromatin compartments involves HBx	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus Homo sapiens	31	BIGWIG SRA Run Selector	Jan Postberg	Apr 30, 2018
GSE110061	Direct DNA crosslinking with CAP-C uncovers transcription-dependent chromatin organization at high resolution	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus Homo sapiens Drosophila melanogaster	76	BIGWIG HIC NARROWPEAK TXT SRA Run Selector	Youzhi Cheng	Aug 22, 2020
GSE111105	Transcriptional analysis of PPARgamma activation in control and PPARgamma null macrophages	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	38	BIGWIG	Hoang Nguyen	Sep 06, 2018
GSE111855	Learning the cis sequence elements that determine AP-1 monomer specificity (RNA-seq data sets)	Expression profiling by high throughput sequencing Other	Mus musculus	17	BIGWIG TSV SRA Run Selector	Jenhan Tao	Jan 31, 2019
GSE111856	Learning the cis sequence elements that determine AP-1 monomer specificity	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	51	BIGWIG TSV	Jenhan Tao	Jan 31, 2019
GSE115110	NF-Y controls fidelity of transcription initiation at gene promoters through maintenance of the nucleosome-depleted region	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	29	BEDGRAPH BIGWIG BW SRA Run Selector	Raja Jothi	Jul 01, 2019
GSE116169	Paf1C regulates RNA polymerase II progression by modulating elongation rate	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	66	BIGWIG SRA Run Selector	Liming H ou	Jun 28, 2019
GSE118794	The Chromatin Reader ZMYND8 Regulates Igh Enhancers to Promote Immunoglobulin Class Switch Recombination	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	44	BIGWIG BW FASTA TSV SRA Run Selector	Thiago Y Oliveira	Oct 04, 2018
GSE120393	Polycomb Mediated Chromatin Organization Reveals Transcriptional Silencers Required for Embryonic Development	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	107	BIGWIG BROADPEAK FPKM_TRACKING HIC NARROWPEAK TXT SRA Run Selector	Chia-Lin Wei	Jan 07, 2020
GSE120630	IKZF2 is required for myeloid leukemic stem cells by driving self-renewal and inhibiting the myeloid differentiation program	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	18	BIGWIG TXT	Hyein Sophia Cho	Sep 29, 2018