GEO Browser - GEO

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155 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Other	Mus musculus		BED
GSE76420	LncRNA DINO guides DNA damage signaling	Expression profiling by array Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	56	BED NARROWPEAK	Adam Schmitt	Dec 30, 2015
GSE79615	MYD88-dependent dendritic and epithelial cell crosstalk in the lung orchestrates immune responses to inhaled allergens	Expression profiling by array Other	Mus musculus	92	BED CEL CHP RCC	Seddon Thomas	Mar 10, 2018
GSE125149	Condensin II is recruited to promoters by pRb and regulates expression of divergently paired genes	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	48	BED CEL	Fred Dick	Nov 04, 2019
GSE60738	Dynamics of gene silencing during X inactivation using allele-specific RNA-Seq	Expression profiling by high throughput sequencing Other	Mus musculus	20	BED TXT WIG SRA Run Selector	Hendrik Marks	Jun 15, 2015
GSE67955	The landscape of global-long range interactions in mouse and human blood cell lines mediated by Yy1, GATA1, and CTCF during differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	18	BED TXT SRA Run Selector	Marissa Macchietto	Apr 30, 2019
GSE68582	Local Genome Topology Can Exhibit an Incompletely Rewired 3D-Folding State During Somatic Cell Reprogramming	Expression profiling by high throughput sequencing Other	Mus musculus	20	BED TXT SRA Run Selector	Jennifer E Phillips-Cremins	May 05, 2016
GSE76248	MiCEE: a ncRNA-protein complex mediates epigenetic silencing and nucleolus organization	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Mus musculus	12	BED BEDGRAPH TXT SRA Run Selector	Guillermo Barreto	Apr 06, 2018
GSE84899	Cdx and T Brachyury co-activate growth signaling in the embryonic axial progenitor niche.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	55	BED BW CSV WIG SRA Run Selector	Jacqueline Deschamps	Dec 20, 2016
GSE85164	DHX9 suppresses spurious RNA processing defects originating from the Alu invasion of the human genome	Expression profiling by high throughput sequencing Other	Drosophila melanogaster Homo sapiens Mus musculus	90	BED BIGWIG	Asifa Akhtar	Mar 28, 2017
GSE88817	In situ CAPTURE of chromatin interactions by biotinylated dCas9	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	175	BED WIG	Jian Xu	Aug 24, 2017
GSE89960	An environment-dependent transcriptional network regulates human microglia phenotypes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	41	BED CSV SRA Run Selector	Dylan Derik Skola	May 25, 2017
GSE90561	Sox2 is required for functional chromatin connectivity in brain-derived neural stem cells.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	65	BED BEDGRAPH BEDPE TXT	Federico Zambelli	Mar 07, 2019
GSE93427	Analysis of non-methylated islands, sites of accessible chromatin and nascent transcriptome in C127 mouse cell line. [C127_BioCAP-ATAC-4sU]	Expression profiling by high throughput sequencing Other	Mus musculus	9	BED BW SRA Run Selector	Vincenzo Di Cerbo	Sep 05, 2017
GSE98119	The energetics and physiological impact of cohesin extrusion	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	352	BED BEDGRAPH BW HIC NARROWPEAK TXT SRA Run Selector	Seolkyoung Jung	May 01, 2018
GSE98309	miR-140 mutation and skeletal dysplasia	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Mus musculus	32	BED	Hiroshi I. Suzuki	Jan 29, 2019
GSE98466	The RNA-binding proteins Igf2bp3 and Lin28b cooperate to control a fetal-adult hematopoietic switch	Expression profiling by high throughput sequencing Other	Mus musculus	19	BED BW	Stefan A Muljo	Jun 27, 2019
GSE98671	Targeted degradation of CTCF decouples local insulation of chromosome domains from genomic compartmentalization	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	102	BED BW COOL FASTA TXT SRA Run Selector	Elphege Nora	May 25, 2017
GSE100733	LRPPRC-mediated folding of the mitochondrial transcriptome	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	28	BED BEDGRAPH TXT	Stefan J Siira	Nov 21, 2017
GSE106423	Epitranscriptomic m6A Regulation of Axon Regeneration in the Adult Mammalian Nervous System	Expression profiling by high throughput sequencing Other	Mus musculus	24	BED BEDGRAPH TXT SRA Run Selector	Guo-li Ming	Jan 17, 2018
GSE112136	Mammalian ISWI and SWI/SNF selectively mediate binding of distinct groups of transcription factors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	90	BED MATRIX TSV WIG	Dirk Schuebeler	Apr 18, 2019