GEO Browser - GEO

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1030 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Other	Mus musculus
GSE205783	Sequential and directional insulation by conserved CTCF sites underlies the Hox timer in stembryos	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	170	BEDGRAPH BIGWIG COOL NARROWPEAK TXT	Lucille Lopez-Delisle	Apr 28, 2023
GSE227750	3D genome organization coordinates key regulators of lineage specification in mammary epithelial cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	150	BW MTX TXT	Yunshun Chen	Sep 08, 2023
GSE228930	3D genome organization coordinates key regulators of lineage specification in mammary epithelial cells [MEC_Omni-C]	Other	Mus musculus	6	BED MTX	Gordon K Smyth	Sep 08, 2023
GSE228954	3D genome organization coordinates key regulators of lineage specification in mammary epithelial cells [T8_Omni-C]	Other	Mus musculus	6	BED MTX	Gordon K Smyth	Sep 08, 2023
GSE244952	3D genome organization during TGFB-induced transcription requires nuclear microRNA and G-quadruplexes	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	25	BW TXT XLS XLSX	Guillermo Barreto	Sep 27, 2024
GSE244949	3D genome organization during TGFB-induced transcription requires nuclear microRNA and G-quadruplexes [ChIRP_seq]	Other	Mus musculus	2	BW XLS	Guillermo Barreto	Sep 27, 2024
GSE243476	4DNES18BMU79 - Replicate experiments of in situ Hi-C on olfactory receptor cell with DpnII	Other	Mus musculus	2	BED BW MCOOL PAIRS SRA Run Selector	4DN DCIC	Sep 19, 2023
GSE243477	4DNES425UDGS - Replicate experiments of in situ Hi-C on immediate neuronal precursor cell with DpnII	Other	Mus musculus	2	BED BW MCOOL PAIRS SRA Run Selector	4DN DCIC	Sep 19, 2023
GSE243479	4DNESEPDL6KY - Replicate experiments of in situ Hi-C on olfactory receptor cell with DpnII	Other	Mus musculus	2	BED BW MCOOL PAIRS SRA Run Selector	4DN DCIC	Sep 19, 2023
GSE243482	4DNESRE7AK5U - Replicate experiments of in situ Hi-C on globose cell of olfactory epithelium with DpnII	Other	Mus musculus	1	BED BW MCOOL PAIRS SRA Run Selector	4DN DCIC	Sep 19, 2023
GSE114121	5C-ID: Increased resolution Chromosome-Conformation-CaptureCarbon-Copy with in situ 3C and double alternating primer design	Other	Mus musculus	7	BED TXT SRA Run Selector	Jennifer E Phillips-Cremins	May 07, 2018
GSE131902	5hmC RNA role in mouse Embryonic stem cell differentiation to Embryonic bodies	Expression profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	57	BED TXT	Martin Bizet	Jul 16, 2020
GSE131899	5hmC RNA role in mouse Embryonic stem cell differentiation to Embryonic bodies [TetRIP-seq]	Other	Mus musculus	20	TXT SRA Run Selector	Martin Bizet	Jul 16, 2020
GSE69143	7SK-BAF axis controls pervasive transcription at enhancers	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	74	BW	Ryan Alexander Flynn	Feb 01, 2016
GSE69139	7SK-BAF axis controls pervasive transcription at enhancers [ATAC-Seq]	Other	Mus musculus	4	BW SRA Run Selector	Ryan Alexander Flynn	Feb 01, 2016
GSE69142	7SK-BAF axis controls pervasive transcription at enhancers [GRO-Seq]	Expression profiling by high throughput sequencing Other	Mus musculus	8	BW SRA Run Selector	Ryan Alexander Flynn	Feb 01, 2016
GSE72599	7SK-BAF axis controls pervasive transcription at enhancers [icShape]	Other	Mus musculus	12	XLSX SRA Run Selector	Ryan Alexander Flynn	Feb 01, 2016
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	244	BED BEDPE BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE96998	A Comprehensive Roadmap of the Mammalian Ribo-interactome Connects Metabolism Enzymes with Specialized ER-Ribosomes	Expression profiling by high throughput sequencing Other	Mus musculus	6	BW CSV SRA Run Selector	Gerald Tiu	Jun 01, 2017
GSE199805	A CpG island-encoded mechanism protects genes from premature transcription termination	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Drosophila melanogaster Homo sapiens Mus musculus	124		Emilia Dimitrova	Dec 21, 2022