GEO Browser - GEO

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193 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL16417	Other	Mus musculus		TXT
GSE173224	Full-length dystrophin restoration via targeted genomic integration by AAV-CRISPR in a humanized mouse model of Duchenne muscular dystrophy	Other	Mus musculus	186	BAM TXT SRA Run Selector	Adrian Oliver	Apr 24, 2021
GSE66092	PAPERCLIP Identifies MicroRNA Targets and a Role of CstF64/64tau in Promoting Non-canonical poly(A) Site Usage.	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	32	BED BEDGRAPH TXT SRA Run Selector	Hun-Way Hwang	Feb 19, 2016
GSE67516	A comprehensive Xist interactome reveals cohesin repulsion and an RNA-directed chromosome conformation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	42	BED BW TXT XLS XLSX SRA Run Selector	John Edward Froberg	Jun 19, 2015
GSE71154	m6A-CLIP identified major presence of m6A in last exons	Other	Homo sapiens Mus musculus	8	BED BEDGRAPH TXT SRA Run Selector	Shengdong Ke	Sep 28, 2015
GSE77788	Phosphatidylinositol 3-Kinase (PI3K) delta blockade increases genomic instability in B cells	Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	162	BED TXT SRA Run Selector	Roberto Chiarle	Jan 31, 2017
GSE80280	3D structures of individual mammalian genomes reveal principles of nuclear organization	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	42	BED HDF5 PDB TSV TXT XYZ SRA Run Selector	Andre J Faure	Mar 07, 2017
GSE82255	Destabilization of B2 RNA by EZH2 activates the stress response	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Mus musculus	61	BED BW TXT SRA Run Selector	Athanasios Zovoilis	Dec 19, 2016
GSE87548	Layer-specific ATAC-seq of the neurons of adult mouse visual cortex defined by Cre-driver lines	Other	Mus musculus	20	BED BROADPEAK NARROWPEAK TXT SRA Run Selector	Lucas T Gray	Jan 01, 2017
GSE111205	The bipartite TAD organization of the X-inactivation centre ensures opposing developmental regulation of Tsix and Xist	Expression profiling by high throughput sequencing Other	Mus musculus	73	BED MATRIX TXT SRA Run Selector	Nicolas Servant	May 27, 2019
GSE120666	Characterisation by Next generation Capture-C of Pax6 locus in three mouse cell lines (MV+, RAG and β-TC3 cells).	Other	Mus musculus	20	BED BEDGRAPH TXT SRA Run Selector	nick gilbert	Oct 18, 2018
GSE124596	A conserved noncoding locus modulates random monoallelic Xist expression across a TAD boundary	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	56	BED BEDGRAPH BW CSV TXT SRA Run Selector	Nicolas Servant	Dec 01, 2019
GSE130224	The Fundamental Role of Chromatin Loop Extrusion in Physiological V(D)J Recombination	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Genome variation profiling by high throughput sequencing	Mus musculus	133	BED BEDGRAPH BEDPE BW HIC TXT	Frederick W Alt	Aug 19, 2019
GSE140975	Wapl repression by Pax5 promotes loop extrusion and V gene recombination at the Igh locus	Other Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	170	BED BEDGRAPH BW HIC TXT SRA Run Selector	Meinrad Busslinger	Jul 01, 2020
GSE166123	Epigenetic dysregulation impairs high-fidelity DNA repair to promote cerebellar degeneration in spinocerebellar ataxia type 7	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	16	BED BIGWIG TXT	Pawel Michal Switonski	Feb 04, 2021
GSE184490	Dynamic Runx1 chromatin boundaries affect gene expression in hematopoietic development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	132	BED BEDGRAPH TXT SRA Run Selector	Dominic Owens	Dec 16, 2021
GSE210289	Igh and Igk loci use different folding principles for V gene recombination due to distinct chromosomal architectures of pro-B and pre-B cells	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	36	BED BEDGRAPH HIC MCOOL TXT	Meinrad Busslinger	Jan 15, 2023
GSE214438	Age-associated chromatin re-organization in progenitor B cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Genome variation profiling by high throughput sequencing	Mus musculus	76	BED BEDPE TXT	Yaqiang Cao	Mar 01, 2024
GSE242585	ChIA-PET from Patski (ENCSR045WUV)	Other	Mus musculus	2	BED BEDPE BIGBED BIGINTERACT BIGWIG HIC TXT	ENCODE DCC	Sep 07, 2023
GSE242599	ChIA-PET from embryonic stem cell (ENCSR780SBE)	Other	Mus musculus	1	BED BEDPE BIGBED BIGINTERACT BIGWIG HIC TXT	ENCODE DCC	Sep 07, 2023
GSE242608	ChIA-PET from Patski (ENCSR564BAB)	Other	Mus musculus	3	BED BEDPE BIGBED BIGINTERACT BIGWIG HIC TXT	ENCODE DCC	Sep 07, 2023