GEO Browser - GEO

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71 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other			TDF
GSE62690	N6-Methyldeoxyadenosine Marks Active Transcription Start Sites in Chlamydomonas	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Chlamydomonas reinhardtii	14	TDF SRA Run Selector	Guan-Zheng Luo	Apr 30, 2015
GSE153436	PCB126 (3,3',4,4',5-Pentachlorobiphenyl) induced alterations in m6A RNA modifications in zebrafish embryos	Expression profiling by high throughput sequencing Other	Danio rerio	16	TDF SRA Run Selector	Neelakanteswar Aluru	Jun 29, 2020
GSE77341	Pho and Ph, H3K27me3 and Engrailed ChIP-seq data in PRE-deleted third instar Drosophila larval brains and disks and 4C-seq data in the third instar larval brains and disks	Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster	24	BEDGRAPH TDF SRA Run Selector	sandip de	Sep 24, 2016
GSE77342	4C-seq data and Pho and Ph, H3K27me3 and Engrailed ChIP-seq data in wildtype and PRE-deleted third instar Drosophila larval brains and disks	Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster	35	TDF	sandip de	Apr 06, 2016
GSE141377	CDK12 and CDK13	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens	124	BIGWIG BW CSV GFF TDF TSV	Zheng Fan	Apr 29, 2020
GSE163780	Long reads Nanopore-seq of pulled down RNA using probes against mbl-exon2	Other	Drosophila melanogaster	2	TDF SRA Run Selector	Sebastian Kadener	Dec 01, 2023
GSE135949	Epigenetic competition reveals density-dependent regulation and target site plasticity of phosphorothioate epigenetics in bacteria	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Escherichia coli BW25113 Escherichia coli K-12 Salmonella enterica	39	TDF TXT	Xiaolin Wu	May 21, 2020
GSE111930	An endogenous retrovirus-derived long non-coding RNA promotes fetal cardiomyocyte migration in primates	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Gorilla gorilla Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	60	BW HIC TDF TXT SRA Run Selector	Lei Tian	Aug 11, 2020
GSE54365	High-resolution mapping reveals a conserved, widespread, dynamic meiotically regulated mRNA methylation program	Other	Homo sapiens Mus musculus	76	BED TDF	Schraga Schwartz	Jul 18, 2014
GSE55572	High-resolution mapping reveals a conserved, widespread, dynamic meiotically regulated mRNA methylation program [Hs]	Other	Homo sapiens	50	BED TDF SRA Run Selector	Schraga Schwartz	Jul 18, 2014
GSE62777	Integrative analyses of human reprogramming reveal dynamic nature of induced pluripotency	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus synthetic construct	317	BED TDF TXT	Shannan J Ho Sui	Jul 16, 2015
GSE63874	High-throughput sequencing of DNA G-quadruplex structures in the human genome	Other	Homo sapiens	4	BED BEDGRAPH TDF TXT SRA Run Selector	Giovanni Marsico	Jul 19, 2015
GSE76055	Regulation of enhancer dynamics by MED12	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	48	BW CEL TDF WIG	Beatriz Aranda-Orgilles	Aug 25, 2016
GSE78172	DSBCapture: in situ capture and direct sequencing of dsDNA breaks	Other Expression profiling by high throughput sequencing	Homo sapiens	11	BED BEDGRAPH NARROWPEAK TDF TXT SRA Run Selector	Giovanni Marsico	Jul 18, 2016
GSE83860	Crosstalk between androgen and proinflammatory signaling activates a distinct transcription program in prostate cancer cells	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens	46	BED TDF SRA Run Selector	Einari A Niskanen	Oct 05, 2016
GSE97541	A Unique B-cell Regulome links Notch to Downstream Oncogenic Pathways in Small B-cell Lymphoma	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens	111	TDF TXT SRA Run Selector	Russell James Hubbard Ryan	Jun 03, 2018
GSE97827	RNA pol II Dynamics Modulate Co-transcriptional Chromatin Modification, CTD phosphorylation and transcriptional direction	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Saccharomyces cerevisiae	53	BW TDF SRA Run Selector	David L. Bentley	May 24, 2017
GSE104334	Cohesin loss eliminates all loop domains	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	132	BW HIC TDF	Suhas Rao	Oct 05, 2017
GSE118093	N6-methyladenine DNA Modification in Glioblastoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Homo sapiens	50	BED BIGWIG BW NARROWPEAK TDF TXT	Jeremy Rich	Nov 01, 2018
GSE118912	Activity-by-Contact model of enhancer specificity from thousands of CRISPR perturbations	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	46	HIC TDF TXT	Jesse Engreitz	Oct 21, 2019