GEO Browser - GEO

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19 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other			RDATA
GSE152001	Pseudoautosomal region 1 overdosage affects the global transcriptome in iPSCs from patients with Klinefelter syndrome and high-grade X chromosome aneuploidies	Expression profiling by high throughput sequencing Other	Homo sapiens	72	RDATA XLSX SRA Run Selector	Antonio Adamo	Feb 03, 2022
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	244	BED BEDPE BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE183420	Transcriptional repressor FOXD3 safeguards genome integrity in embryonic stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	112	BW H5 RDATA	Robert Blelloch	Apr 30, 2023
GSE149790	RNA-binding protein Syncrip regulates Starvation-Induced Hyperactivity in adult Drosophila	Expression profiling by high throughput sequencing Other	Drosophila melanogaster	8	RDATA TXT SRA Run Selector	Wanhao Chi	Jul 20, 2020
GSE196456	Clonal dynamics of SARS-CoV-2-specific T cells in children and adults with COVID-19	Expression profiling by high throughput sequencing Other	Homo sapiens	56	RDATA SRA Run Selector	Peter Croucher	Jan 11, 2023
GSE273927	Spatial transcriptomics reveals tanscriptional perturbations leading to uterine squamous metaplasia, atrophy, and infertility in a mouse model of RTHa	Other	Mus musculus blank sample	191	CSV DCC PKC RDATA	Elijah F Edmondson	Aug 29, 2024
GSE156047	The SvFUL2 transcription factor is required for inflorescence determinacy and timely flowering in Setaria viridis	Expression profiling by high throughput sequencing Other	Setaria viridis	26	RDATA TXT XLSX	Andrea Eveland	Apr 02, 2021
GSE229532	MacroH2A restricts melanoma progression via inhibition of chemokine expression in cancer-associated fibroblasts [spatial transcriptomics]	Other Expression profiling by high throughput sequencing	Mus musculus	2	CSV H5 JSON PNG RDATA	Dan Filipescu	Jun 09, 2023
GSE186599	TULIPs decorate the three-dimensional genome of PFA ependymoma	Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	160	BED BEDGRAPH BEDPE BROADPEAK BW GTF HIC MCOOL RDATA TDF TSV WIG	Marco Gallo	Jul 05, 2024
GSE221377	Chromatin remodeler Fun30 promotes efficient DSB end resection and recombination during yeast meiosis	Other	Saccharomyces cerevisiae	15	RDATA TXT	Pei-Ching Huang	May 01, 2023
GSE209865	Robust methylation based classification of brain tumors using nanopore sequencing	Methylation profiling by high throughput sequencing Other	Homo sapiens	415	BED RDATA TSV	Luis Philipp Kuschel	Jul 30, 2022
GSE225047	T cell immunotherapies trigger neutrophil activation to eliminate tumor antigen escape variants [scRNA-Seq]	Expression profiling by high throughput sequencing Other	Mus musculus	6	RDATA TXT	Levi Mark Bala Mangarin	Mar 30, 2023
GSE166922	A Nuclear factor I-X mediated regulatory network governs the balance of hematopoietic stem and progenitor cells during hematopoiesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	24	BW RDATA SRA Run Selector	Shannon McKinney-Freeman	Dec 02, 2022
GSE206294	Dose-dependent disruption of hepatic zonation by 2,3,7,8-tetrachlorodibenzo-p-dioxin in mice: integration of single-nuclei RNA sequencing and spatial transcriptomics	Other	Mus musculus	17	RDATA TIFF TXT	Rance Nault	Oct 21, 2022
GSE105010	Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain	Expression profiling by high throughput sequencing Other	Danio rerio	72	CSV GTF RDATA TXT SRA Run Selector	Bushra Raj	Feb 09, 2018
GSE197610	The RNA Binding Protein Dead End1 Is Differentially Expressed in Male Germ Cells During Late Gestation and Targets Chromatin Modifiers and Translational Machinery	Expression profiling by high throughput sequencing Other Third-party reanalysis	Mus musculus	34	CLOUPE CSV MTX RDATA SF TSV TXT XLSX	Victor A Ruthig	Oct 18, 2022
GSE206436	DUX4 orchestrates translational reprograming by broadly suppressing translation efficiency [polysome-seq]	Other	Homo sapiens	24	CSV RDATA	Stephen Tapscott	Apr 11, 2023
GSE116472	Single-molecule nascent RNA sequencing reveals regulatory domain architecture ant promoters and enhancers	Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	14	BW RDATA SRA Run Selector	Jacob Michael Tome	Jul 02, 2018
GSE155280	scChIX-seq infers dynamic relationships between histone modifications in single cells	Other	Mus musculus	33	BAM BW CSV RDATA TXT SRA Run Selector	Jake Yeung	Nov 30, 2021