GEO Browser - GEO

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444 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other			NARROWPEAK
GSE206875	A non-coding single nucleotide polymorphism at 8q24 drives IDH1-mutant glioma formation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	24	ZIP NARROWPEAK	Daniel Schramek	Sep 12, 2022
GSE121140	Genomic and Epigenomic EBF1 Alterations Modulate TERT Expression in Gastric Cancer	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens	75	XLSX XLS TXT NARROWPEAK BW	Wen Fong Ooi	Oct 30, 2020
GSE173446	The 3D enhancer network of the developing T cell genome is controlled by SATB1 [Hi-C]	Other	Mus musculus	14	XLSX NARROWPEAK HIC BED SRA Run Selector	Tomas Zelenka	Sep 23, 2022
GSE184322	CRSPR/Cas9 gene knockout screen identifies colorectal cancer dependency on cryptic open reading frames	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	28	XLSX TSV NARROWPEAK CSV SRA Run Selector	Yiwen Chen	Aug 06, 2023
GSE188721	Essential role of MESP1-RING1A complex in cardiac differentiation	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens	46	XLSX NARROWPEAK HIC BED SRA Run Selector	Siqing Wang	Oct 17, 2022
GSE208742	Direct neuronal reprogramming of mouse astrocytes is associated with multiscale epigenome remodeling and requires Yy1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	64	XLSX TXT TSV TAB NARROWPEAK MTX BW BEDGRAPH BED SRA Run Selector	Boyan Bonev	Apr 30, 2024
GSE218416	Establish the male meiocyte-specific epigenomic landscape	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Oryza sativa Indica Group Oryza sativa Japonica Group	20	XLSX NARROWPEAK MAP BW	feng zhao	Nov 23, 2022
GSE219097	Cdc73 protects Notch-induced T-cell leukemia cells from DNA damage and mitochondrial stress [Bru-seq and BruUV-seq]	Other	Mus musculus	36	XLSX NARROWPEAK CSV BIGWIG BED	Brian Magnuson	Aug 30, 2023
GSE118514	CRISPR-mediated deletion of prostate cancer risk-associated CTCF loop anchors identifies repressive chromatin loops	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	32	XLS TXT TAB NARROWPEAK GFF BED SRA Run Selector	Yu (Phoebe) Guo	Aug 15, 2018
GSE130687	An epitranscriptomic switch at the 5´-UTR controls genome selection during HIV-1 genomic RNA packaging	Other	HIV-1 vector pNL4-3 Homo sapiens	14	XLS NARROWPEAK BEDGRAPH BED SRA Run Selector	Daniela Toro Ascuy	Jan 02, 2021
GSE249408	Identification of MBL-1 target transcript through RIP-seq.	Other	Caenorhabditis elegans	6	XLS NARROWPEAK BED	Jens Verbeeren	Dec 12, 2023
GSE51341	Conservation of mouse-human trans-regulatory circuitry despite high cis-regulatory divergence	Other	Homo sapiens Mus musculus	32	WIG TXT NARROWPEAK BROADPEAK BIGWIG BED BAM	ENCODE DCC	Nov 19, 2014
GSE81203	Polarized regulatory landscape and Wnt responsiveness underlie Hox activation in embryos	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	65	WIG NARROWPEAK BW BEDGRAPH SRA Run Selector	Jacqueline Deschamps	Sep 16, 2016
GSE95015	The cohesin release factor WAPL restricts chromatin loop extension.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	63	WIG TXT NARROWPEAK	Robin H. van der Weide	May 03, 2017
GSE118392	Integrated Paired-end Enhancer Profiling and Whole-Genome Sequencing Reveals Recurrent CCNE1 and IGF2 Enhancer Hijacking in Primary Gastric Adenocarcinoma	Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	54	WIG TXT NARROWPEAK HIC	Wen Fong Ooi	Oct 02, 2019
GSE131055	Dynamic CTCF occupancy during differentiation rewires cis-regulatory module interactions essential for development	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	43	WIG TXT NARROWPEAK BW	Yong Cheng	Jan 18, 2021
GSE159546	Glucocorticoid receptor axis in lung cancer	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	79	WIG TXT NARROWPEAK CSV SRA Run Selector	Stefan Prekovic	May 31, 2021
GSE166074	A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis [Cut&Run IFNgvsCtr]	Other	Mus musculus	21	WIG NARROWPEAK BROADPEAK SRA Run Selector	Eneritz Agirre	Jan 28, 2022
GSE178484	Role of the cellular factor CTCF in the regulation of Bovine Leukemia Virus latency and three-dimensional chromatin organization	Genome binding/occupancy profiling by high throughput sequencing Other	Ovis aries	20	WIG NARROWPEAK BW	Peter Krijger	Feb 18, 2022
GSE188493	Histone chaperone ASF1 mediates H3.3-H4 deposition in Arabidopsis	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	101	WIG TXT RESULTS NARROWPEAK BW SRA Run Selector	Zhenhui Zhong	Oct 27, 2022