Accession | Title | Series type(s) | Organism(s) | Samples | GDS | Supplementary | Contact | Release date |
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GSE196450 |
Context-dependent perturbations in chromatin folding and the transcriptome by cohesin and related factors
|
126 | Ryuichiro Nakato | Jul 28, 2023 | ||||
GSE215325 |
Doxorubicin Changes the Spatial Organization of the Genome around Active Promoters
|
30 |
|
Maria Valieva | Mar 31, 2023 | |||
GSE126112 |
3D ATAC-PALM: Super-resolution Imaging of the Accessible Genome
|
14 |
|
Robert Tjian | Jan 29, 2020 | |||
GSE146901 |
3D Genome Analysis Identifies Enhancer Hijacking Mechanism for High-Risk Factors in Human T-Lineage Acute Lymphoblastic Leukemial (T-ALL)
|
52 | Hong Wu | Mar 20, 2021 | ||||
GSE169120 |
3D chromatin topography of LSK cells with hyperactivated Notch1 and/or Tcf7 knock-out [HiC-seq]
|
|
6 | Nadine Fournier | Jan 21, 2022 | |||
GSE201878 |
3D genome organization in the epithelial-mesenchymal transition spectrum [Hi-C]
|
|
4 | Tuan Zea Tan | May 08, 2022 | |||
GSE220303 |
3D genome remodeling and homologous pairing during meiotic prophase of mouse oogenesis and spermatogenesis
|
44 | Jing He | Sep 23, 2023 | ||||
GSE246125 |
3D genome topology distinguishes molecular subgroups of medulloblastoma
|
55 | Marco Gallo | Sep 29, 2024 | ||||
GSE169088 |
3D genomics across the tree of life reveals condensin II as a determinant of architecture type
|
|
|
32 |
|
Olga Dudchenko | Apr 23, 2021 | |
GSE158281 |
4C-seq on MYC/IRF8
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|
6 |
|
Zhendong Cao | Sep 06, 2021 | ||
GSE128952 |
A DNA tumor virus globally reprograms host 3D genome architecture to achieve immortal growth
|
32 | Sizun Jiang | Dec 22, 2022 | ||||
GSE245495 |
A MYOD-SKP2 axis boosts tumorigenesis in fusion negative rhabdomyosarcoma by preventing differentiation through p57Kip2 targeting [Hi-ChIP]
|
2 | Matteo Cassandri | Oct 16, 2023 | ||||
GSE277290 |
A STAG2-PAXIP1/PAGR1 axis suppresses lung tumorigenesis
|
|
4 |
|
Jesse R Dixon | Oct 22, 2024 | ||
GSE235704 |
A SWI/SNF-dependent transcriptional regulation mediated by POU2AF2/C11orf53 at enhancer
|
50 |
|
Lu Wang | Jan 19, 2024 | |||
GSE155839 |
A Transcriptional State Driven by Yin Yang 1 Confers a Therapeutic Vulnerability in Glioblastoma Stem Cells
|
21 |
|
Zhixin Qiu | Jun 01, 2022 | |||
GSE137274 |
A WIZ/Cohesin/CTCF complex anchors DNA loops to define gene expression and cell identity [Hi-C]
|
|
4 |
|
Jill Dowen | Apr 14, 2020 | ||
GSE212696 |
A biophysical basis for the diffusion-restricted behavior of Xist RNA
|
|
4 | Jeannie T Lee | Jan 17, 2025 | |||
GSE153574 |
A cohesin cancer mutation reveals a role for the hinge domain in genome organization and gene expression [Hi-C]
|
|
4 | Zachary Carico | Feb 23, 2021 | |||
GSE125972 |
A distal super enhancer mediates estrogen-dependent mouse uterine–specific gene transcription of Insulin-like growth factor 1 (Igf1)
|
38 | Sylvia C Hewitt | May 08, 2019 | ||||
GSE232887 |
A gene desert required for regulatory control of pleiotropic Shox2 expression and embryonic survival
|
17 |
|
Marco Osterwalder | Jun 01, 2024 |