GEO Browser - GEO

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55 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other			FPKM_TRACKING
GSE41785	Global analysis of Upf1 in mESCs reveals expanded scope of nonsense-mediated mRNA decay	Expression profiling by high throughput sequencing Other	Mus musculus	23	BED FPKM_TRACKING SRA Run Selector	Jessica Hurt	Jun 12, 2013
GSE53144	Male and Female DNA and RNA sequencing in several nematode species	Expression profiling by high throughput sequencing Other	Caenorhabditis brenneri Caenorhabditis briggsae Caenorhabditis elegans Caenorhabditis remanei Pristionchus pacificus	31	BEDGRAPH FPKM_TRACKING SRA Run Selector	Sarah Elizabeth Albritton	Apr 17, 2014
GSE62193	Dissecting neural differentiation regulatory networks through epigenetic footprinting	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens	99	FPKM_TRACKING TXT SRA Run Selector	Michael Johannes Ziller	Nov 02, 2014
GSE61348	Endogenous miRNA and target concentrations determine susceptibility to potential ceRNA competition, based on hierarchical binding affinities	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Mus musculus	9	BW FPKM_TRACKING GTF TXT	Jesse R Zamudio	Nov 10, 2014
GSE62907	The inactive X chromosome is epigenetically unstable and transcriptionally labile in breast cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Genome variation profiling by SNP array SNP genotyping by SNP array	Homo sapiens	39	BEDGRAPH CEL FPKM_TRACKING TXT	Ronan Chaligné	Jan 19, 2015
GSE62966	Analysis of allele specific expression and its chromatin state to identify genes that are escaping X chromosome inactivation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	29	BEDGRAPH FPKM_TRACKING TXT XLS SRA Run Selector	Ronan Chaligné	Jan 22, 2015
GSE66440	IGF2BP2/IMP2 Deficient Mice Resist Obesity through enhanced translation of Ucp1 mRNA and other mRNAs encoding Mitochondrial Proteins	Expression profiling by high throughput sequencing Other	Mus musculus	26	FPKM_TRACKING TXT SRA Run Selector	Diego Borges-Rivera	Mar 03, 2015
GSE59119	The contribution of cohesin-SA1 to chromatin architecture and gene expression in two murine tissues	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	51	FPKM_TRACKING TXT ZIP SRA Run Selector	Ana Losada	Apr 07, 2015
GSE73021	Transcription of mammalian cis-regulatory elements is restrained by actively enforced early termination [additional RNA]	Expression profiling by high throughput sequencing Other	Mus musculus	14	FPKM_TRACKING GTF TXT SRA Run Selector	Iros Barozzi	Nov 09, 2015
GSE61910	Reduced expression of RBM47 enhances Nrf2 activity to promote tumor growth in A549 lung adenocarcinoma cells	Expression profiling by high throughput sequencing Other	Homo sapiens	8	FPKM_TRACKING SRA Run Selector	Daizo Koinuma	Mar 01, 2016
GSE68022	Identification of New Branch Points and Unconventional Introns in Saccharomyces cerevisiae	Expression profiling by high throughput sequencing Other	Saccharomyces cerevisiae Saccharomyces cerevisiae S288C	30	FPKM_TRACKING XLSX SRA Run Selector	Geneveive Gould	Aug 01, 2016
GSE86466	Proteomic and genomic characterization of a yeast model for Ogden syndrome [RNA-seq and Ribo-seq]	Expression profiling by high throughput sequencing Other	Saccharomyces cerevisiae	6	FPKM_TRACKING SRA Run Selector	Gholson Lyon	Sep 07, 2016
GSE86482	Proteomic and genomic characterization of a yeast model for Ogden syndrome	Expression profiling by array Expression profiling by high throughput sequencing Other	Saccharomyces cerevisiae	22	FPKM_TRACKING TXT	Gholson Lyon	Sep 07, 2016
GSE95744	ICF-specific DNMT3B dysfunction interferes with intragenic regulation of mRNA transcription and alternative splicing (RIP-seq)	Other	Homo sapiens	8	FPKM_TRACKING SRA Run Selector	Miriam Gagliardi	Mar 07, 2017
GSE95747	ICF-specific DNMT3B dysfunction interferes with intragenic regulation of mRNA transcription and alternative splicing	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	40	BED FPKM_TRACKING TXT	Miriam Gagliardi	Mar 07, 2017
GSE90702	Identification of the embryonic germ cell Meioc-/- transcriptome, MEIOC targets in postnatal testis, and YTHDC2 targets in postnatal testis in mouse	Expression profiling by high throughput sequencing Other	Mus musculus	26	FPKM_TRACKING TXT	Maria M. Mikedis	Mar 22, 2017
GSE94813	Sequencing the DNA and mRNA from the same single cell	Expression profiling by high throughput sequencing Other	Mus musculus	12	FPKM_TRACKING TXT SRA Run Selector	Zhoufang Li	Apr 11, 2017
GSE94098	FTO regulates adult neurogenesis through modulating the dynamics of N6-methyladenosine	Expression profiling by high throughput sequencing Other	Mus musculus	12	FPKM_TRACKING TDF TXT SRA Run Selector	Feiran Zhang	Apr 20, 2017
GSE83728	Epigenetic Lanscape and BRD4 Transcriptional Dependency of PAX3-FOXO1 Driven Rhabdomyosarcoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	80	BED BEDGRAPH FPKM_TRACKING	Xinyu Wen	Apr 27, 2017
GSE90752	Mechanisms of transcription factor-mediated direct reprogramming of mouse embryonic stem cells to trophoblast stem-like cells	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	25	BED FPKM_TRACKING TXT SRA Run Selector	Jonghwan Kim	Jul 25, 2017