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198 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other			FASTA
GSE116290	PD-1/PD-L1 immune checkpoint and p53 loss facilitate tumor progression in activated B cell diffuse large B-cell lymphomas	Expression profiling by array Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	33	FASTA PAIR TXT	SERGIO ROA	Apr 19, 2019
GSE26757	Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Other	Medicago sativa	6	FASTA TXT SRA Run Selector	Sam Yang	Apr 21, 2011
GSE27994	Expressed sequences and polymorphisms in rohu carp (Labeo rohita, Hamilton) revealed by mRNA-seq	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Other	Labeo rohita	2	BAM FASTA	Matthew Baranski	Jan 01, 2013
GSE35631	Testing the limits of 454 pyrotag sequencing: reproducibility, quantitative assessment and comparison to T-RFLP fingerprinting of aquifer microbes	Expression profiling by high throughput sequencing Other	Aliivibrio fischeri aquifer metagenome environmental samples environmental samples environmental samples	21	FASTA TXT SRA Run Selector	Giovanni Pilloni	Jul 16, 2012
GSE63224	Comprehensive transcriptome analysis of phytohormone pathway genes and miRNAs in ABA initiated strawberry receptacle ripening	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Fragaria x ananassa	21	FASTA TXT XLSX SRA Run Selector	Dongdong Li	Oct 27, 2016
GSE63473	Highly parallel genome-wide expression profiling of individual cells using nanoliter droplets	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus synthetic construct	203	BAM FASTA GTF TXT	Evan Macosko	May 20, 2015
GSE63750	Prolonged growth of a clinical S. aureus strain selects for a stable SCV and Full genomic characterization of the development in a clinical Staphylococcus aureus strain of a stable Small Colony Variant cell-type	Expression profiling by high throughput sequencing Other	Staphylococcus aureus	5	CSV FASTA TXT XLSX SRA Run Selector	Long M.G Bui	Dec 02, 2014
GSE66694	Drop-Seq analysis of ERCC spike in capture	Expression profiling by high throughput sequencing Other	synthetic construct	1	BAM FASTA GTF TXT SRA Run Selector	Evan Macosko	May 20, 2015
GSE67937	The menu of features that define primary microRNAs and enable de novo design of microRNA genes	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Homo sapiens synthetic construct	22	FASTA TXT XLSX SRA Run Selector	Wenwen Fang	Sep 24, 2015
GSE82222	Neurospora crassa genome organization requires subtelomeric facultative heterochromatin	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Neurospora crassa	16	BCF FASTA GTF TDF TXT XLSX SRA Run Selector	Andrew David Klocko	Oct 27, 2016
GSE87118	The Escherichia coli nucleoid is shaped around replication and transcription	Expression profiling by high throughput sequencing Other	Escherichia coli	10	FASTA TXT	Justin M. O'Sullivan	Dec 25, 2017
GSE98671	Targeted degradation of CTCF decouples local insulation of chromosome domains from genomic compartmentalization	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	102	BED BW COOL FASTA TXT SRA Run Selector	Elphege Nora	May 25, 2017
GSE109343	Lso2 is a conserved ribosome-bound protein required for translational recovery in yeast	Expression profiling by high throughput sequencing Other	Saccharomyces cerevisiae	25	BED BEDGRAPH FASTA GFF TXT WIG SRA Run Selector	Yinuo Wang	Sep 12, 2018
GSE109926	Conserved Methyltransferase Spb1 Targets mRNAs for Regulated Modification with 2′-O-Methyl Ribose [eCLIP]	Expression profiling by high throughput sequencing Other	Saccharomyces cerevisiae	21	BED CSV FASTA GTF SRA Run Selector	Wendy Gilbert	Jan 16, 2019
GSE113695	EIF1AX-A113 splice and RAS mutations cooperate to drive thyroid tumorigenesis through ATF4 and c-MYC	Expression profiling by high throughput sequencing Other	Homo sapiens	18	FASTA TXT SRA Run Selector	Gunnar Rätsch	Jan 28, 2019
GSE113831	The influenza B virus hemagglutinin head domain is less tolerant to transposon mutagenesis than that of the influenza A virus	Expression profiling by high throughput sequencing Other	Influenza A virus Influenza B virus	26	FASTA XLSX SRA Run Selector	Peter Palese	Jun 05, 2018
GSE116597	Dietary iron drives conversion of an enteric pathogen to commensalism via host metabolic alteration	Expression profiling by high throughput sequencing Other	Citrobacter rodentium Mus musculus	20	FASTA VCF	April Elizabeth Williams	Sep 21, 2018
GSE118794	The Chromatin Reader ZMYND8 Regulates Igh Enhancers to Promote Immunoglobulin Class Switch Recombination	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	44	BIGWIG BW FASTA TSV SRA Run Selector	Thiago Y Oliveira	Oct 04, 2018
GSE119454	Assembly and functionality of the ribosome with tethered subunits	Expression profiling by high throughput sequencing Other	Escherichia coli	8	CSV FASTA WIG SRA Run Selector	Adam John Hockenberry	Feb 25, 2019
GSE123613	Pseudouridine synthases modify human pre-mRNA co-transcriptionally and affect splicing	Expression profiling by high throughput sequencing Other	Homo sapiens	60	CSV FASTA TXT SRA Run Selector	Wendy Gilbert	Feb 15, 2022