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2544 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other			BW
GSE43542	H3K4me3 Interactions with TAF3 Regulate Preinitiation Complex Assembly and Selective Gene Activation	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	16	BED BW TXT	Xiaolin Wu	Mar 02, 2013
GSE44163	Let-7 represses Nr6a1 and a mid-gestation developmental program in adult fibroblasts	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Mus musculus	52	BED BW CEL TXT	A Bhutkar	Apr 10, 2013
GSE63974	Regulation of transcriptional elongation in pluripotency and cell differentiation by the PHD-finger protein Phf5a	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	95	BW CEL WIG	Alexandros Strikoudis	Aug 31, 2016
GSE70343	Long Noncoding RNA Inhibits Hepatocyte Proliferation during Liver Regeneration	Expression profiling by array Expression profiling by high throughput sequencing Non-coding RNA profiling by array Other	Mus musculus	40	BW	Sagar S Damle	Jun 26, 2015
GSE71218	How C/EBPa creates an elite cell state for reprogramming to pluripotency	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	68	BW TXT	samuel Collombet	Feb 19, 2016
GSE74250	Transcriptome analysis of diverse cell types infected with human cytomegalovirus	Expression profiling by array Expression profiling by high throughput sequencing Other	Homo sapiens	40	BED BEDGRAPH BW CEL	Gene Yeo	Sep 17, 2016
GSE75356	A zebrafish melanoma model reveals emergence of neural crest identity during melanoma initiation	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Danio rerio Homo sapiens	48	BW NARROWPEAK	Leonard Zon	Feb 01, 2016
GSE76055	Regulation of enhancer dynamics by MED12	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	48	BW CEL TDF WIG	Beatriz Aranda-Orgilles	Aug 25, 2016
GSE77634	Enhanced CLIP (eCLIP) enables robust and scalable transcriptome-wide discovery and characterization of RNA binding protein binding sites	Expression profiling by array Expression profiling by high throughput sequencing Other	Homo sapiens	100	BB BED BW CEL	Gene Yeo	Mar 28, 2016
GSE86464	HNRNPA2B1 regulates alternative RNA processing in the nervous system and accumulates in granules in ALS IPSC-derived motor neurons	Expression profiling by array Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Homo sapiens Mus musculus	124	BED BW CEL CSV	Gene Yeo	Oct 20, 2016
GSE90034	Srf destabilizes cell identity	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	41	BEDGRAPH BW CEL TXT	Takashi Ikeda	Apr 18, 2018
GSE99607	Impaired DNA demethylation of C/EBP sites causes premature aging	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	58	BW TAR TSV TXT	Emil Karaulanov	Jun 11, 2018
GSE126123	LncRNA HAND2-AS1 controls liver cancer stem cell functions and serves as a potential therapy target	Expression profiling by array Other	Homo sapiens	14	BW TXT	Runsheng Chen	Feb 06, 2019
GSE148321	Dietary palmitic acid promotes a prometastatic epigenetic memory related to tumor innervation	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	1134	BROADPEAK BW CEL MTX TSV XLS ZIP	Antoni Berenguer-LLergo	Nov 16, 2021
GSE161100	An RFX/miR-150 axis restrains proliferation of primary human T lymphocytes	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	58	BW RCC	Francesco Gualdrini	Jan 10, 2022
GSE45242	HoxD locus	Expression profiling by genome tiling array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array Other	Atelerix albiventris Mus musculus	32	BAR BED BEDGRAPH BW CEL	Marion LELEU	Oct 23, 2013
GSE84883	Transient RNA-DNA Hybrids Are Required for Efficient Double-Strand Break Repair	Expression profiling by genome tiling array Other	Schizosaccharomyces pombe	16	BEDGRAPH BW TXT	Tamas Fischer	Oct 28, 2016
GSE42237	The genomic landscape of cohesin-associated chromatin interactions	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	26	BED BW SRA Run Selector	Laura DeMare	May 22, 2013
GSE42819	The landscape of RNA polymerase II transcription initiation in C. elegans reveals a novel regulatory architecture	Expression profiling by high throughput sequencing Other	Caenorhabditis elegans	5	BB BW SRA Run Selector	Thomas A Down	Mar 29, 2013
GSE43390	Pausing of RNA polymerase II regulates mammalian developmental potential	Expression profiling by high throughput sequencing Other	Mus musculus	12	BEDGRAPH BW SRA Run Selector	Karen Adelman	Mar 12, 2015