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2650 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other			BW
GSE217591	Chromatin states at homeoprotein loci distinguish axolotl limb segments prior to regeneration [Cut&Tag]	Other	Ambystoma mexicanum	63	BW	Jingkui Wang	Apr 10, 2023
GSE217594	Chromatin states at homeoprotein loci distinguish axolotl limb segments prior to regeneration	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Ambystoma mexicanum	113	BW	Jingkui Wang	Apr 10, 2023
GSE233471	The sex-specific factor SOA establishes X chromosome dosage compensation in Anopheles mosquitos [Mybless-CUTnTag]	Other	Anopheles gambiae	8	BW	Frank Rühle	Jul 25, 2023
GSE233472	The sex-specific factor SOA establishes X chromosome dosage compensation in Anopheles mosquitos [SOAR-CUTnTag]	Other	Anopheles gambiae	7	BW	Frank Rühle	Jul 25, 2023
GSE75506	Profiling of N6-Adenosine (m6A) Methylation in Arabidopsis thaliana wild-type and fip37-4 LEC1:FIP37	Other	Arabidopsis thaliana	8	BW SRA Run Selector	Hao Yu	Jul 25, 2016
GSE75508	RNA-Seq and N6-Adenosine (m6A) Methylation profiling in Arabidopsis thaliana wild-type and fip37-4 LEC1:FIP37	Expression profiling by high throughput sequencing Other	Arabidopsis thaliana	14	BW TXT	Hao Yu	Jul 25, 2016
GSE85203	Combining ATAC-seq with nuclei sorting for discovery of cis-regulatory regions in plant genomes	Other	Arabidopsis thaliana Zea mays subsp. mays	14	BED BW SRA Run Selector	Robert J Schmitz	Nov 30, 2016
GSE95765	Genome-wide maps of R-loops in Arabidopsis	Other	Arabidopsis thaliana	5	BW NARROWPEAK SRA Run Selector	li kuan	May 31, 2017
GSE107883	Functional analysis of HD2C in Arabidopsis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Arabidopsis thaliana	9	BW TXT SRA Run Selector	Xuehua Zhong	Mar 01, 2018
GSE108078	RNA-directed DNA methylation involves co-transcriptional small RNA-guided slicing of Pol V transcripts in Arabidopsis.	Non-coding RNA profiling by high throughput sequencing Other	Arabidopsis thaliana	21	BW TXT SRA Run Selector	Wanlu Liu	Jan 29, 2018
GSE110342	Impact of G-content on Arabidopsis AtPAB binding and their role in enhancing translational efficiency	Other Expression profiling by high throughput sequencing	Arabidopsis thaliana	31	BED BW FPKM_TRACKING SRA Run Selector	xiaofeng cao	Aug 14, 2019
GSE113677	Transcription-driven Chromatin Repression of Intragenic Promoters	Expression profiling by high throughput sequencing Other	Arabidopsis thaliana	9	BW SRA Run Selector	Maxim Ivanov	Apr 26, 2018
GSE116232	R-loop landscapes in Arabidopsis	Other	Arabidopsis thaliana	53	BW SRA Run Selector	li kuan	Feb 19, 2020
GSE119304	Transcriptional read-through of the long non-coding RNA SVALKA governs plant cold acclimation	Other	Arabidopsis thaliana	4	BW SRA Run Selector	Maxim Ivanov	Sep 01, 2018
GSE121683	ALBA protein complex reads genic R-loops to maintain genome stability in Arabidopsis	Other	Arabidopsis thaliana	2	BW SRA Run Selector	Jincong Zhou	Apr 17, 2019
GSE122394	DNA methylation and histone H1 jointly repress transposable elements and aberrant intragenic transcripts	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Arabidopsis thaliana	132	BW GFF SRA Run Selector	Jaemyung Choi	Nov 20, 2019
GSE125096	pNET-seq (Pol II Ser5) in Arabidopsis	Other	Arabidopsis thaliana	4	BW SRA Run Selector	Jincong Zhou	Nov 01, 2019
GSE128619	Wide spread and efficient co-transcriptional splicing facilitated by multiple exons	Expression profiling by high throughput sequencing Other	Arabidopsis thaliana	20	BW XLSX SRA Run Selector	mao fei	Nov 20, 2019
GSE128932	Arabidopsis retrotransposon virus-like-particles and their regulation by epigenetically activated small RNA	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	48	BEDGRAPH BW TXT VCF SRA Run Selector	Robert A Martienssen	Mar 13, 2020
GSE131733	Transient genome-wide adaptations of nascent RNAPII transcription triggered by low temperature	Other	Arabidopsis thaliana	13	BW SRA Run Selector	Maxim Ivanov	Dec 11, 2019