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2740 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other			BW
GSE84365	RNA-seq and ChIP-seq data of ASXL1/2 in Hematopoiesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	54	BIGWIG BW TXT	Omar Abdel-Wahab	Jun 26, 2017
GSE122157	Condensin II inactivation in interphase does not affect chromatin folding or gene expression	Other Expression profiling by high throughput sequencing	Mus musculus	6	BW COOL XLSX SRA Run Selector	Nezar Abdennur	May 05, 2019
GSE169561	In vivo dissection of a clustered-CTCF domain boundary reveals developmental principles of regulatory insulation	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	42	BW HIC	Rafael Domínguez Acemel	May 05, 2022
GSE118716	Epigenetic reprogramming at estrogen-receptor binding sites alters 3D chromatin landscape in endocrine resistant breast cancer	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	40	BB BW HIC TXT VCF	Joanna Achinger-Kawecka	Dec 11, 2019
GSE171074	The potential of epigenetic therapy to target the 3D epigenome in endocrine-resistant breast cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by array Other Methylation profiling by high throughput sequencing	Homo sapiens	88	BED BW HIC IDAT NARROWPEAK TXT	Joanna Achinger-Kawecka	Dec 12, 2021
GSE67941	Genome-wide analysis of human global and transcription-coupled excision repair of UV damage at single-nucleotide resolution	Other	Homo sapiens	12	BW SRA Run Selector	Sheera Adar	Apr 19, 2015
GSE76391	Genome-wide kinetics of DNA excision repair in relation to chromatin state and mutagenesis	Other	Homo sapiens	30	BW SRA Run Selector	Sheera Adar	Mar 15, 2016
GSE82213	Cisplatin DNA Damage and Repair Maps of the Human Genome at Single-nucleotide Resolution	Other	Homo sapiens	14	BW SRA Run Selector	Sheera Adar	Sep 16, 2016
GSE173201	Genomic characterization of cisplatin response uncovers priming of cispla-tin-induced genes in a resistant cell line	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	18	BW CSV NARROWPEAK SRA Run Selector	Sheera Adar	Jun 07, 2021
GSE43390	Pausing of RNA polymerase II regulates mammalian developmental potential	Expression profiling by high throughput sequencing Other	Mus musculus	12	BEDGRAPH BW SRA Run Selector	Karen Adelman	Mar 12, 2015
GSE85191	Widespread transcriptional pausing and elongation control at enhancers	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster Mus musculus	37	BEDGRAPH BW SRA Run Selector	Karen Adelman	Mar 09, 2018
GSE114467	The Integrator complex terminates promoter-proximal transcription at protein-coding genes	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	16	BEDGRAPH BW SRA Run Selector	Karen Adelman	Nov 27, 2019
GSE149766	Negative Elongation Factor (NELF) regulation of muscle progenitor expansion assessed via Precision Run-On Sequencing (PRO-seq)	Expression profiling by high throughput sequencing Other	Mus musculus	8	BW TSV SRA Run Selector	Karen Adelman	Apr 12, 2021
GSE198517	Inhibition of SWI/SNF broadly disrupts enhancers and reveals remodeler redundancy at promoters	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	107	BW TSV XLSX	Karen Adelman	Nov 02, 2023
GSE200698	Integrator endonuclease drives promoter-proximal termination at all RNAPII transcribed loci (PRO-Seq)	Other	Mus musculus	4	BW	Karen Adelman	Oct 28, 2022
GSE200701	Integrator endonuclease drives promoter-proximal termination at all RNAPII transcribed loci (TT-seq)	Other	Mus musculus	6	BW	Karen Adelman	Oct 28, 2022
GSE226013	Engineered MED12 mutations drive uterine fibroid-like transcriptional and metabolic programs by altering the 3D genome compartmentalization [CUT&Tag]	Other	Homo sapiens	5	BW NARROWPEAK	MAZHAR ADLI	Jun 16, 2023
GSE226015	Engineered MED12 mutations drive uterine fibroid-like transcriptional and metabolic programs by altering the 3D genome compartmentalization [Hi-C]	Other	Homo sapiens	2	BW HIC	MAZHAR ADLI	Jun 16, 2023
GSE226017	Engineered MED12 mutations drive uterine fibroid-like transcriptional and metabolic programs by altering the 3D genome compartmentalization	Other Expression profiling by high throughput sequencing	Homo sapiens	27	BW HIC NARROWPEAK TXT	MAZHAR ADLI	Jun 16, 2023
GSE154741	Autocrine vitamin D signaling switches off pro-inflammatory programs of Th1 cells	Expression profiling by high throughput sequencing Other	Homo sapiens	45	BED BW TXT XLSX SRA Run Selector	Behdad (Ben) Afzali Khoshkbijari	Oct 19, 2021