GEO Browser - GEO

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2510 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other			BW
GSE33664	Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	10	BAM BED BW TXT SRA Run Selector	Guoliang Li	Jan 20, 2012
GSE43542	H3K4me3 Interactions with TAF3 Regulate Preinitiation Complex Assembly and Selective Gene Activation	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by array	Homo sapiens Mus musculus	16	BED BW TXT	Xiaolin Wu	Mar 02, 2013
GSE42819	The landscape of RNA polymerase II transcription initiation in C. elegans reveals a novel regulatory architecture	Expression profiling by high throughput sequencing Other	Caenorhabditis elegans	5	BB BW SRA Run Selector	Thomas A Down	Mar 29, 2013
GSE44163	Let-7 represses Nr6a1 and a mid-gestation developmental program in adult fibroblasts	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array Other	Mus musculus	52	BED BW CEL TXT	A Bhutkar	Apr 10, 2013
GSE45828	Let-7 represses Nr6a1 and a mid-gestation developmental program in adult fibroblasts [CLIP-Seq]	Other	Mus musculus	2	BW TXT SRA Run Selector	A Bhutkar	Apr 10, 2013
GSE43801	Enrichment of processed pseudogene transcripts in L1-ribonucleoprotein particles	Expression profiling by high throughput sequencing Other	Homo sapiens	5	BW SRA Run Selector	Adam D Ewing	May 21, 2013
GSE42237	The genomic landscape of cohesin-associated chromatin interactions	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	26	BED BW SRA Run Selector	Laura DeMare	May 22, 2013
GSE47207	An integrated 5'- and 3'-end RNA sequencing platform for high-throughput transcriptome quantitation and annotation	Expression profiling by high throughput sequencing Other	Drosophila melanogaster Mus musculus	10	BW TXT SRA Run Selector	Sabah Kadri	Jun 01, 2013
GSE44360	Spatial organization of chromatin at the HoxD locus in developing caeca (4C-seq)	Other	Mus musculus	10	BEDGRAPH BW SRA Run Selector	Marion LELEU	Oct 23, 2013
GSE45242	HoxD locus	Other Genome binding/occupancy profiling by genome tiling array Expression profiling by genome tiling array Expression profiling by high throughput sequencing	Atelerix albiventris Mus musculus	32	BAR BED BEDGRAPH BW CEL	Marion LELEU	Oct 23, 2013
GSE44267	Cohesin and CTCF Differentially Affect the Chromatin Architecture and Gene Expression in Human Cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	18	BW RPKM TXT SRA Run Selector	Jesse R Dixon	Dec 16, 2013
GSE48518	Interactions between JARID2 and noncoding RNAs regulate PRC2 recruitment to chromatin	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	45	BW	Roberto Bonasio	Dec 25, 2013
GSE50610	Role of DNA methylation in modulating transcription factor occupancy	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens	23	BED BW SRA Run Selector	Matthew T Maurano	Feb 28, 2014
GSE54794	Rbfox2 controls autoregulation in RNA binding protein networks	Expression profiling by high throughput sequencing Other	Mus musculus	10	BED BW TXT SRA Run Selector	Mohini Jangi	Mar 17, 2014
GSE55342	4C-seq: Temporal dynamics and developmental memory of 3D chromatin architecture at Hox gene loci	Other	Mus musculus	41	BEDGRAPH BW SRA Run Selector	Marion LELEU	Apr 28, 2014
GSE55344	Temporal dynamics and developmental memory of 3D chromatin architecture at Hox gene loci	Other Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	47	BEDGRAPH BW TXT	Marion LELEU	Apr 28, 2014
GSE53020	Domain ChIRP reveals the modularity of long noncoding RNA architecture, function, and target genes	Other	Drosophila melanogaster	12	BED BW SRA Run Selector	Kun Qu	Jun 16, 2014
GSE38275	ChIP-seq and RIP-seq for SCML2 and SCML2 mutants in 293T-REx and K562 cells	Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	49	BW WIG	Roberto Bonasio	Jul 02, 2014
GSE52637	HBS1L-MYB intergenic variants modulate fetal hemoglobin via long-range MYB enhancers	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	8	BW SRA Run Selector	Supat Thongjuea	Jul 24, 2014
GSE58907	RepliSeq of HT-1080 cell line	Other	Homo sapiens	6	BED BW SRA Run Selector	John A Stamatoyannopoulos	Jul 31, 2014