GEO Browser - GEO

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2225 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other			BED
GSE18132	Dynamic O-GlcNAc cycling at promoters of C. elegans genes regulating Longevity, Stress, and Immunity	Expression profiling by array Genome binding/occupancy profiling by genome tiling array Other	Caenorhabditis elegans	72	BAR BED CEL CHP	Michael Krause	Jan 01, 2010
GSE29780	Integrative regulatory mapping indicates that the RNA-binding protein HuR (ELAVL1) couples pre-mRNA processing and mRNA stability	Expression profiling by array Other	Homo sapiens	13	BED CEL	Neelanjan Mukherjee	Aug 19, 2011
GSE43542	H3K4me3 Interactions with TAF3 Regulate Preinitiation Complex Assembly and Selective Gene Activation	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	16	BED BW TXT	Xiaolin Wu	Mar 02, 2013
GSE44163	Let-7 represses Nr6a1 and a mid-gestation developmental program in adult fibroblasts	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Mus musculus	52	BED BW CEL TXT	A Bhutkar	Apr 10, 2013
GSE45025	Placing the HIRA histone chaperone complex in the chromatin landscape	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	15	BED BIGWIG CEL TXT	Peter D. Adams	Apr 18, 2013
GSE60392	Global Promotion of Alternative Internal Exon Usage by mRNA 3' End Formation Factors	Expression profiling by array Expression profiling by high throughput sequencing Other	Homo sapiens	17	BED CEL TXT	Ashish Misra	Jul 15, 2015
GSE62047	Nuclear stability and transcriptional directionality separate functionally distinct RNA species.	Expression profiling by array Other	Homo sapiens	11	BED BEDGRAPH	Robin Andersson	Oct 04, 2014
GSE65491	Regulatory RNA Apela Is a Component of a Negative Feedback Loop Regulating p53-Mediated Apoptosis in Embryonic Stem Cells	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	31	BED CEL TXT XLS	Jing Huang	Jun 05, 2015
GSE66039	Global analysis of androgen-signaling reveals the function of miRNAs for the epigenomic regulation in prostate cancer cells	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Homo sapiens	73	BED CEL CHP	Ken-ichi Takayama	Sep 01, 2015
GSE67823	Master transcription factors in corneal epithelial cells	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	41	BED BIGWIG CEL TXT	Koji Kitazawa	Apr 11, 2016
GSE70677	Genome-wide definition of regulatory elements in hematopoietic stem cell differentiation	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	27	BED CEL	Silvio Bicciato	Apr 20, 2016
GSE74250	Transcriptome analysis of diverse cell types infected with human cytomegalovirus	Expression profiling by array Expression profiling by high throughput sequencing Other	Homo sapiens	40	BED BEDGRAPH BW CEL	Gene Yeo	Sep 17, 2016
GSE76420	LncRNA DINO guides DNA damage signaling	Expression profiling by array Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	56	BED NARROWPEAK	Adam Schmitt	Dec 30, 2015
GSE77634	Enhanced CLIP (eCLIP) enables robust and scalable transcriptome-wide discovery and characterization of RNA binding protein binding sites	Expression profiling by array Expression profiling by high throughput sequencing Other	Homo sapiens	100	BB BED BW CEL	Gene Yeo	Mar 28, 2016
GSE77707	Distinct and shared functions of ALS-associated TDP-43, FUS, and TAF15 revealed by comprehensive multi-system integrative analyses	Expression profiling by array Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	48	BED CEL CSV WIG	Gene Yeo	Jul 05, 2016
GSE79615	MYD88-dependent dendritic and epithelial cell crosstalk in the lung orchestrates immune responses to inhaled allergens	Expression profiling by array Other	Mus musculus	92	BED CEL CHP RCC	Seddon Thomas	Mar 10, 2018
GSE86464	HNRNPA2B1 regulates alternative RNA processing in the nervous system and accumulates in granules in ALS IPSC-derived motor neurons	Expression profiling by array Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Homo sapiens Mus musculus	124	BED BW CEL CSV	Gene Yeo	Oct 20, 2016
GSE87671	Identifying Nuclear Matrix-attached DNA across the Genome	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	29	BED CEL	Jonathan AR Gordon	Oct 06, 2016
GSE94824	Super-enhancer Driven Core Regulatory Circuitry in MYCN-amplified Neuroblastoma	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	30	BED CEL WIG	Richard A Young	May 22, 2018
GSE101864	Chronic Cigarette Smoke-Induced Epigenomic, gene expression and chromatin changes in Bronchial Epithelial Cells	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by genome tiling array Other	Homo sapiens	86	BED IDAT PDF TXT	Hariharan Easwaran	Oct 21, 2017