GEO Browser - GEO

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37 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other			BAM
GSE21977	De novo transcriptome sequencing in Anopheles funestus using Illumina RNA-seq technology	Expression profiling by high throughput sequencing Other	Anopheles funestus	1	BAM SRA Run Selector	Jacob Crawford	Dec 01, 2010
GSE27994	Expressed sequences and polymorphisms in rohu carp (Labeo rohita, Hamilton) revealed by mRNA-seq	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Other	Labeo rohita	2	BAM FASTA	Matthew Baranski	Jan 01, 2013
GSE31105	Chromatin Conformation Capture in two biological replicates of K562 cells to identify interactions between tRNA genes in human cells.	Other	Homo sapiens	2	BAM BED SRA Run Selector	Jesse Raab	Oct 10, 2011
GSE33664	Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	10	BAM BED BW TXT SRA Run Selector	Guoliang Li	Jan 20, 2012
GSE51334	DNA replication-timing boundaries separate stable chromosome domains with cell-type-specific functions	Other	Homo sapiens Mus musculus	993	BAM BED BIGWIG BROADPEAK NARROWPEAK PAIR TSV TXT	ENCODE DCC	Nov 20, 2014
GSE51341	Conservation of mouse-human trans-regulatory circuitry despite high cis-regulatory divergence	Other	Homo sapiens Mus musculus	32	BAM BED BIGWIG BROADPEAK NARROWPEAK TXT WIG	ENCODE DCC	Nov 19, 2014
GSE63269	Drop-Seq analysis of mixtures of human (HEK) and mouse (3T3) cells (1000/100 STAMPs) at 50 cells per microliter	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	2	BAM TXT SRA Run Selector	Evan Macosko	May 20, 2015
GSE63472	Drop-Seq analysis of P14 mouse retina single-cell suspension	Expression profiling by high throughput sequencing Other	Mus musculus	7	BAM TXT SRA Run Selector	Evan Macosko	May 20, 2015
GSE63473	Highly parallel genome-wide expression profiling of individual cells using nanoliter droplets	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus synthetic construct	203	BAM FASTA GTF TXT	Evan Macosko	May 20, 2015
GSE66693	Drop-Seq analysis of mixtures of human (HEK) and mouse (3T3) cells (1000/100 STAMPs) at 12.5 cells per microliter	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	1	BAM TXT SRA Run Selector	Evan Macosko	May 20, 2015
GSE66694	Drop-Seq analysis of ERCC spike in capture	Expression profiling by high throughput sequencing Other	synthetic construct	1	BAM FASTA GTF TXT SRA Run Selector	Evan Macosko	May 20, 2015
GSE69584	Target discrimination in nonsense-mediated mRNA decay requires Upf1 ATPase activity (CLIP-Seq)	Other	Homo sapiens	6	BAM SRA Run Selector	Gene Yeo	Jul 06, 2015
GSE75183	Principles for RNA metabolism and alternative transcription initiation within closely spaced promoters	Other	Homo sapiens	2	BAM SRA Run Selector	Aino Inkeri Järvelin	May 13, 2016
GSE99921	Extensive sex differences at the initiation of meiotic recombination	Genome binding/occupancy profiling by high throughput sequencing Other Third-party reanalysis Methylation profiling by high throughput sequencing	Mus musculus	22	BAM BED BEDGRAPH SRA Run Selector	Kevin Brick	Sep 20, 2018
GSE103693	The Identification and Characterization of Sindbis Virus RNA:Host Protein Interactions	Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	5	BAI BAM XLSX SRA Run Selector	Kevin J Sokoloski	Jan 02, 2018
GSE109003	Xrn2 accelerates termination by RNA polymerase II, which is underpinned by CPSF73 activity	Expression profiling by high throughput sequencing Other	Homo sapiens	10	BAM BW SRA Run Selector	Steven West	Feb 13, 2018
GSE109560	Transcriptome-wide view of endosomal mRNP transport [RNA-Seq]	Other	Mycosarcoma maydis	6	BAM SRA Run Selector	Kathi Zarnack	Dec 10, 2018
GSE109561	Transcriptome-wide view of endosomal mRNP transport	Other Expression profiling by high throughput sequencing	Mycosarcoma maydis	12	BAM BW	Kathi Zarnack	Dec 10, 2018
GSE141290	Pervasive promoter-proximal regulation in archaea	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Saccharolobus solfataricus Saccharolobus solfataricus P2	84	BAM BW	Finn Werner	Sep 14, 2020
GSE144245	m6A RNA methylation regulates promoter proximal pausing of RNA Pol II (DRB-4sU-seq)	Other	Drosophila melanogaster	24	BAM SRA Run Selector	Junaid Akhtar	Jul 28, 2021