377 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
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Extensive sex differences in depression-linked variants functionally assayed in mouse brain [Hippocampus]
25 Joseph Dougherty Feb 10, 2023
Extensive sex differences in depression-linked variants functionally assayed in mouse brain [P0&P10]
44 Joseph Dougherty Feb 10, 2023
mDRIP-seq is a high-throughput method for quantitative R-loop landscape profiling
384 Changbin Sun Jun 11, 2024
Mitochondrial RNA-seq and total RNA-seq of 293T, HeLa, and N2a cells; RIP-seq of SUPV3L1, ceSUPV3L1, ATP5B, and TRAP1; Small RNA-seq of 293T mitochondrial fractions
34 Xu Liu Dec 19, 2023
Direct DNA crosslinking with CAP-C uncovers transcription-dependent chromatin organization at high resolution
76 Youzhi Cheng Aug 22, 2020
Autonomous transposons tune their sequences to ensure somatic suppression.
153 IBRAHIM AVSAR ILIK Jan 08, 2024
Multimodal profiling of the transcriptional regulatory landscape of the developing mouse cortex identifies Neurog2 as a key epigenome remodeler
36 Boyan Bonev Jan 27, 2022
Joint epigenome profiling reveals cell-type-specific gene regulatory programs in human cortical organoids
27 Boyan Bonev Aug 23, 2023
Sequencing of N6-methyl-deoxyadenosine at single-base resolution across the mammalian genome
67 Xiaolong Cui Dec 28, 2023
The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis
868 Beisi Xu May 03, 2017
Activation of HOTTIP lncRNA perturbs HSC function leading to AML like disease
66 Suming Huang Dec 03, 2019
HOXBLINC is aberrantly expressed in acute myeloid leukemia and functions as a potent oncogenic long non-coding RNA in leukemogenesis
40 Suming Huang Jan 27, 2021
A neutropenia-associated transcription factor mutation differentially impacts target genes in the cell-states traversed during granulocyte specification and commitment
833 H. Leighton Grimes Apr 06, 2020
MAFG-driven astrocytes promote CNS inflammation
163 Michael Wheeler Feb 12, 2020
Genetic interaction mapping and exon-resolution functional genomics with a hybrid Cas9-Cas12a platform
  • Other
14 Jason Moffat Jan 28, 2020
Self-reporting transposons enable simultaneous readout of gene expression and transcription factor binding in single cells
  • Other
27 Robi D Mitra Jul 23, 2020
Optimized photochemistry and enzymology enable efficient analysis of RNA structures and interactions in cells
21 Minjie Zhang Mar 04, 2021
m6A directs the demethylation of histone H3K9me2 co-transcriptionall
56 linjian xia Jul 01, 2020
A single-cell method to map higher-order 3D genome organization in thousands of individual cells reveals structural heterogeneity in mouse ES cells
  • Other
3 Mary Villanueva Arrastia Aug 12, 2020
PIE-Seq: Identifying RNA-binding Protein Targets by Dual RNA-deaminase Editing and Sequencing
66 Xiangbin Ruan May 17, 2023