GEO Browser - GEO

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273 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Other			SRA Run Selector
GSE156683	Epigenomic Landscape of Mouse Brain by Single Nucleus Methylation Sequencing [CEMBA snm3C-seq]	Methylation profiling by high throughput sequencing Other	Mus musculus	5398	TSV TXT SRA Run Selector	Joseph R Ecker	Oct 12, 2020
GSE146397	Diploid chromatin conformation capture (Dip-C) of single cells from the developing mouse cortex and hippocampus	Other	Mus musculus	2544	BED HIC TXT SRA Run Selector	Longzhi Tan	Jan 07, 2021
GSE190955	Complex Genomic Patterns of Abasic Sites in Mammalian DNA Revealed by High-Resolution SSiNGLe-AP Method	Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	271	BED FA TXT SRA Run Selector	Huifen Cao	Sep 15, 2022
GSE169505	Molecular roadmap of the healthy stress response in the mouse hippocampus	Expression profiling by high throughput sequencing Other	Mus musculus	250	H5 TXT SRA Run Selector	Lukas Matthias von Ziegler	Mar 25, 2021
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	244	BED BEDPE BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE158730	NFI transcription factors regulate zonal olfactory receptor expression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	237	BIGWIG BW CIF CLOUPE COOL CSV H5 JSON PNG TIFF TXT SRA Run Selector	Elizaveta Bashkirova	Jun 14, 2023
GSE184894	SMYD5 catalyzes histone H3 lysine 36 trimethylation at promoters	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	223	BW TXT SRA Run Selector	Dong Fang	Apr 26, 2022
GSE178832	Multiplexed‌ ‌profiling‌ ‌facilitates‌ ‌robust‌ ‌m6A‌ ‌ quantification‌ ‌at‌ ‌site,‌ ‌gene‌ ‌and‌ ‌sample‌ ‌resolution	Other	Mus musculus Saccharomyces cerevisiae	210	BW SRA Run Selector	David Dierks	Jun 25, 2021
GSE184884	GPS2 sensitizes IL4 pathway via the recruitments of KDM1A	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	203	BEDGRAPH TXT XLSX SRA Run Selector	Zhiqiang Huang	Dec 14, 2022
GSE162739	BAP1 activity regulates Polycomb occupancy and global chromatin condensation counteracting diffuse PCGF3/5-dependent H2AK119ub1 deposition	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	192	BED RPKM TSV TXT SRA Run Selector	Federico Rossi	Jun 27, 2021
GSE173224	Full-length dystrophin restoration via targeted genomic integration by AAV-CRISPR in a humanized mouse model of Duchenne muscular dystrophy	Other	Mus musculus	186	BAM TXT SRA Run Selector	Adrian Oliver	Apr 24, 2021
GSE151515	RNA promotes the formation of spatial compartments in the nucleus	Other	Mus musculus	180	BEDGRAPH TXT SRA Run Selector	Sofia Agustina Quinodoz	Nov 04, 2021
GSE178982	Enhancer-promoter interactions and transcription are maintained upon acute loss of CTCF, cohesin, WAPL, and YY1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	173	BW MCOOL SRA Run Selector	Xavier Darzacq	Jul 15, 2021
GSE154051	Calcium Signaling Prompts NIPBL Recruitment at Active Enhancers and Promoters via Distinct Mechanisms to Reconstruct Genome Compartmentalization	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	165	BEDGRAPH BW HIC TXT SRA Run Selector	Cornelis Murre	Oct 10, 2020
GSE172392	Chd4 regulates intra-chromatin looping by concealing CTCF sites from B2 SINEs in mESCs	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	165	BED BW TXT SRA Run Selector	Sungwook Han	May 10, 2022
GSE165863	Landscape of m6A modification in haematopoietic system unveils an essential role of IGF2BP2 in preserving haematopoietic stem cell function	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	157	TSV SRA Run Selector	jiwei chang	Oct 26, 2021
GSE186260	The chemical reprogramming of unipotent adult germ cells towards authentic pluripotency and de novo establishment of imprinting	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	145	COV CSV TXT XLSX SRA Run Selector	Jiansen Lu	Feb 07, 2023
GSE188391	A genetic-metabolic axis for metastatic liver organotropism	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus blank sample	139	CSV H5 MTX TSV SRA Run Selector	Meri Rogava	Aug 29, 2023
GSE180175	Hi-TrAC reveals fine-scale chromatin structures organized by transcription factors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	136	BEDPE BW TXT SRA Run Selector	Yaqiang Cao	Oct 02, 2022
GSE179523	PEAC-seq: an unbiased in vivo CRISPR off-target detection technique	Other	Mus musculus	130	XLSX SRA Run Selector	Lijia Ma	Nov 14, 2022