GEO Browser - GEO

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377 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Other			BW
GSE87064	The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	868	BED BW MTX TSV TXT	Beisi Xu	May 03, 2017
GSE125595	RNA interactions are essential for proper CTCF function	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	24	BW CLOUPE HIC TXT SRA Run Selector	Ricardo Saldana-Meyer	Sep 12, 2019
GSE135031	Stag1 and Stag2 regulate cell fate decisions in hematopoiesis through non-redundant topological control	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	81	BW CSV	Richard Koche	Sep 24, 2019
GSE124596	A conserved noncoding locus modulates random monoallelic Xist expression across a TAD boundary	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	56	BED BEDGRAPH BW CSV TXT SRA Run Selector	Nicolas Servant	Dec 01, 2019
GSE131782	Spen regulates X chromosome inactivation (CUT&RUN)	Other	Mus musculus	10	BW SRA Run Selector	samuel Collombet	Dec 08, 2019
GSE131784	Spen regulates X chromosome inactivation	Expression profiling by high throughput sequencing Other	Mus musculus	73	BW MCOOL TXT	samuel Collombet	Dec 08, 2019
GSE146001	Chromatin architecture reorganization in somatic cell nuclear transfer embryos	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	51	BW TXT SRA Run Selector	Qianshu Zhu	Feb 27, 2020
GSE129037	Uncoupling histone H3K4 trimethylation from developmental gene expression via an epigenetic equilibrium of Polycomb, COMPASS and DNA methylation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	128	BW COV TXT SRA Run Selector	Ali Shilatifard	Mar 17, 2020
GSE145871	Maintenance of neural stem cell positional identity by Mixed-lineage leukemia 1	Expression profiling by high throughput sequencing Other	Mus musculus	67	BW H5 SRA Run Selector	Tomasz Nowakowski	Apr 02, 2020
GSE145616	m6A methylation regulates the fate of endogenous retrovirus transcripts	Expression profiling by high throughput sequencing Other	Mus musculus	45	BW TXT	teissandier aurelie	Apr 13, 2020
GSE137285	A WIZ/Cohesin/CTCF complex anchors DNA loops to define gene expression and cell identity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	22	BW	Jill Dowen	Apr 14, 2020
GSE140363	Defining the relative and combined contribution of CTCF and CTCFL to genomic regulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	122	BED BEDGRAPH BROADPEAK BW CSV HIC NARROWPEAK SRA Run Selector	Nishana Mayilaadumveettil	Apr 14, 2020
GSE150384	DNA Double-Strand Breaks Induce H2Ax Phosphorylation Domains in a Contact-Dependent Manner	Other	Mus musculus	32	BW HIC SRA Run Selector	Patrick Leonard Collins	May 13, 2020
GSE123692	β-catenin safeguards the ground state of pluripotency by strengthening the robustness of the transcriptional apparatus	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	24	BW TXT	Yiwei Lai	Jul 01, 2020
GSE140340	β-catenin safeguards the ground state of pluripotency by strengthening the robustness of the transcriptional apparatus [GRO-seq]	Other	Mus musculus	6	BW SRA Run Selector	Yiwei Lai	Jul 01, 2020
GSE153651	m6A directs the demethylation of histone H3K9me2 co-transcriptionall	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	56	BED BW TXT SRA Run Selector	linjian xia	Jul 01, 2020
GSE153403	CTCF Mediates Dosage and Sequence-context-dependent Transcriptional Insulation through Formation of Local Chromatin Domains	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	88	BW HIC TXT	Bing Ren	Jul 06, 2020
GSE141187	H1 linker histones regulate the balance of repressive and active chromatin domains via localized genomic compaction	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	62	BW	Boris Bartholdy	Sep 08, 2020
GSE154051	Calcium Signaling Prompts NIPBL Recruitment at Active Enhancers and Promoters via Distinct Mechanisms to Reconstruct Genome Compartmentalization	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	165	BEDGRAPH BW HIC TXT SRA Run Selector	Cornelis Murre	Oct 10, 2020
GSE139527	Reprogramming of the histone H3.3 landscape in the early mouse embryo	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	73	BW TXT SRA Run Selector	Takashi Ishiuchi	Nov 01, 2020