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1507 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Other
GSE148448	Self-reporting transposons enable simultaneous readout of gene expression and transcription factor binding in single cells	Other	Homo sapiens Mus musculus	27	BAM CSV LOOM TSV TXT SRA Run Selector	Robi D Mitra	Jul 23, 2020
GSE173224	Full-length dystrophin restoration via targeted genomic integration by AAV-CRISPR in a humanized mouse model of Duchenne muscular dystrophy	Other	Mus musculus	186	BAM TXT SRA Run Selector	Adrian Oliver	Apr 24, 2021
GSE246984	The impact of the embryonic DNA methylation program on CTCF-mediated genome regulation	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	28	BB BW	Julien Richard Albert	Jul 23, 2024
GSE87064	The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	868	BED BW MTX TSV TXT	Beisi Xu	May 03, 2017
GSE114981	Activation of HOTTIP lncRNA perturbs HSC function leading to AML like disease	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	66	BED TXT SRA Run Selector	Huacheng Luo	Dec 03, 2019
GSE115096	HOXBLINC is aberrantly expressed in acute myeloid leukemia and functions as a potent oncogenic long non-coding RNA in leukemogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	40	BED TXT SRA Run Selector	Huacheng Luo	Jan 27, 2021
GSE120409	A neutropenia-associated transcription factor mutation differentially impacts target genes in the cell-states traversed during granulocyte specification and commitment	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	833	BED H5 TXT	H. Leighton Grimes	Apr 06, 2020
GSE123670	CTCF Functions as an Insulator for Somatic Genes and a Structural Regulator for Pluripotent Genes during Reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	187	BED BW HIC	ya wei song	Apr 05, 2022
GSE124463	Promoter capture Hi-C identifies long-range promoter contact dynamics in response to diet and the development of non-alcoholic fatty liver disease	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	46	BED BIGWIG TXT SRA Run Selector	Paul A Wade	Jan 01, 2020
GSE124596	A conserved noncoding locus modulates random monoallelic Xist expression across a TAD boundary	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	56	BED BEDGRAPH BW CSV TXT SRA Run Selector	Nicolas Servant	Dec 01, 2019
GSE126362	Pax3 cooperates with Ldb1 to direct local chromosome architecture during lineage specification	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	60	BED HIC SRA Run Selector	Alessandro Magli	Apr 16, 2019
GSE131583	Combined Cohesin-Runx1 Deficiency Synergistically Perturbs Chromatin Looping and Causes Myelodysplastic Syndromes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	123	BED	Yotaro Ochi	Apr 07, 2020
GSE137764	High Resolution Repli-Seq defines the temporal choreography of initiation, elongation and termination of replication in mammalian cells	Other	Homo sapiens Mus musculus	85	BED MAT SRA Run Selector	David M Gilbert	Sep 20, 2019
GSE140363	Defining the relative and combined contribution of CTCF and CTCFL to genomic regulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	122	BED BEDGRAPH BROADPEAK BW CSV HIC NARROWPEAK SRA Run Selector	Nishana Mayilaadumveettil	Apr 14, 2020
GSE141223	E2A Specifies Adaptive Immunity by Instructing Large-Scale Topological Changes	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	62	BED TXT SRA Run Selector	Kazuko Miyazaki	Jul 15, 2020
GSE141587	Transcriptomic and epigenetic disruptions in excitatory neurons in Dnmt3a conditional knockout mouse	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	49	BED BW TSV TXT SRA Run Selector	Joseph R Ecker	May 23, 2022
GSE143736	UTX constrains antiviral CD8+ T cell responses during chronic virus infection	Expression profiling by high throughput sequencing Other	Mus musculus	23	BED BW TXT SRA Run Selector	Joshua Starmer	Feb 09, 2021
GSE146397	Diploid chromatin conformation capture (Dip-C) of single cells from the developing mouse cortex and hippocampus	Other	Mus musculus	2544	BED HIC TXT SRA Run Selector	Longzhi Tan	Jan 07, 2021
GSE150677	Nascent RNA antagonises the interaction of a set of regulatory proteins with chromatin	Other Expression profiling by high throughput sequencing	Mus musculus	34	BED XLSX SRA Run Selector	Richard Jenner	Jun 23, 2021
GSE152176	H1 linker histones regulate the balance of repressive and active chromatin domains via localized genomic compaction [Hi-C]	Other	Mus musculus	4	BED BEDGRAPH MATRIX SRA Run Selector	Boris Bartholdy	Sep 09, 2020