GEO Browser - GEO

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420 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Other			TXT
GSE63473	Highly parallel genome-wide expression profiling of individual cells using nanoliter droplets	Expression profiling by high throughput sequencing Other	synthetic construct Mus musculus Homo sapiens	203	BAM FASTA GTF TXT	Evan Macosko	May 20, 2015
GSE115547	Determination of branch point (BP) usage by wild-type and mutant SF3B1 using a minigene library	Expression profiling by high throughput sequencing Other	synthetic construct Mus musculus Homo sapiens	7	TXT SRA Run Selector	MANOJ PILLAI	Oct 30, 2018
GSE145643	Functional characterization of thousands of type 2 diabetes-associated and chromatin-modulating variants under steady state and endoplasmic reticulum stress	Other	synthetic construct Mus musculus	9	FA TXT SRA Run Selector	Shubham Khetan	Feb 21, 2020
GSE157139	CRISPR and biochemical screens identify MAZ as a co-factor in CTCF-mediated insulation at Hox clusters	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	synthetic construct Mus musculus	138	BEDGRAPH BW HIC NARROWPEAK TXT	Danny Reinberg	Feb 06, 2022
GSE161657	Identifying non-genetic determinants of malignant clonal fitness at single cell resolution (primary leukaemia barcode-seq)	Other	synthetic construct Mus musculus	14	FASTA TXT SRA Run Selector	Mark Dawson	Nov 08, 2021
GSE167352	Non-coding CRISPR interference screen to identify regulatory elements of Xist in TX1072 XX SP107 mESCs at the onset of random X inactivation	Other	synthetic construct Mus musculus	11	TXT SRA Run Selector	Till Schwämmle	Mar 04, 2021
GSE169020	MapToCleave: high-throughput profiling of microRNA biogenesis in living cells	Non-coding RNA profiling by high throughput sequencing Other	synthetic construct Mus musculus Homo sapiens	56	TXT SRA Run Selector	Wenjing Kang	Nov 16, 2021
GSE192435	CRISPR and biochemical screens Identify MAZ as a co-factor in CTCF-mediated insulation at Hox Clusters [CRISPR_set8]	Other	synthetic construct Mus musculus	13	TXT SRA Run Selector	Danny Reinberg	Feb 06, 2022
GSE198728	Paired single-cell host profiling with multiplex-tagged bacterial mutants reveals intracellular virulence-immune networks	Expression profiling by high throughput sequencing Other	synthetic construct Mus musculus	136	TXT	Noa Bossel Ben-Moshe	Jun 21, 2023
GSE210051	DNA barcoding reveals ongoing immunoediting of clonal cancer populations during metastatic progression and in response to immunotherapy [DNA barcodes: IT_and_cont_4T1_BC250000]	Other	synthetic construct Mus musculus	34	TXT XLSX	Alexander Swarbrick	Aug 02, 2022
GSE215065	Regulation of mouse chamber selective enhancers	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	synthetic construct Mus musculus	82	BW TXT	Xiaoran Zhang	Jan 30, 2023
GSE225867	Transcription factor interactions explain the context-dependent activity of CRX binding sites	Other	synthetic construct Mus musculus	4	FA TXT	Michael Aaron White	Mar 05, 2023
GSE237551	Macrophage Mannose receptor (MRC1) mediates uptake of dextran in murine bone-marrow derived macrophages via a receptor-mediated endocytic process	Other	synthetic construct Mus musculus	9	CSV TXT	Natalie W Thiex	Oct 01, 2023
GSE151112	Asterix/Gtsf1 links tRNAs and piRNA silencing of retrotransposons	Other	Spodoptera frugiperda Mus musculus Drosophila melanogaster	24	FASTA TXT	Jonathan James Ipsaro	Feb 20, 2021
GSE111134	A compendium of conserved cleavage and polyadenylation events in mammalian genes	Other	Rattus norvegicus Mus musculus Homo sapiens	128	TXT SRA Run Selector	Bin Tian	Aug 08, 2018
GSE226502	Epigenetic evolution of the Ly49 gene family	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Rattus norvegicus Mus musculus	65	BEDGRAPH BW CSV FA HIC TXT	Changxu Fan	Apr 20, 2024
GSE263137	The tRNA methyltransferase Mettl1 governs ketogenesis through translational regulation and drives metabolic reprogramming in cardiomyocyte maturation	Expression profiling by high throughput sequencing Other	Rattus norvegicus Mus musculus	18	TXT	Tailai Du	Oct 13, 2024
GSE128122	The piRNA Response to Retroviral Invasion of the Koala Genome	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Phascolarctos cinereus Mus musculus	31	TXT SRA Run Selector	Tianxiong Yu	Oct 12, 2019
GSE111930	An endogenous retrovirus-derived long non-coding RNA promotes fetal cardiomyocyte migration in primates	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Pan troglodytes Mus musculus Macaca mulatta Homo sapiens Gorilla gorilla	60	BW HIC TDF TXT SRA Run Selector	Lei Tian	Aug 11, 2020
GSE135498	Sequencing short capped RNAs captures acute transcription initiation and identifies promoter and distal regulatory elements across eukaryotes from total RNA	Other	Oryza sativa Neurospora crassa Nematostella vectensis Mus musculus Homo sapiens Capsaspora owczarzaki	40	BIGWIG BW TXT SRA Run Selector	Christopher Benner	Sep 16, 2019