GEO Browser - GEO

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420 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Other			TXT
GSE205783	Sequential and directional insulation by conserved CTCF sites underlies the Hox timer in stembryos	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	170	BEDGRAPH BIGWIG COOL NARROWPEAK TXT	Lucille Lopez-Delisle	Apr 28, 2023
GSE227750	3D genome organization coordinates key regulators of lineage specification in mammary epithelial cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	150	BW MTX TXT	Yunshun Chen	Sep 08, 2023
GSE244952	3D genome organization during TGFB-induced transcription requires nuclear microRNA and G-quadruplexes	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	25	BW TXT XLS XLSX	Guillermo Barreto	Sep 27, 2024
GSE114121	5C-ID: Increased resolution Chromosome-Conformation-CaptureCarbon-Copy with in situ 3C and double alternating primer design	Other	Mus musculus	7	BED TXT SRA Run Selector	Jennifer E Phillips-Cremins	May 07, 2018
GSE131902	5hmC RNA role in mouse Embryonic stem cell differentiation to Embryonic bodies	Expression profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	57	BED TXT	Martin Bizet	Jul 16, 2020
GSE131899	5hmC RNA role in mouse Embryonic stem cell differentiation to Embryonic bodies [TetRIP-seq]	Other	Mus musculus	20	TXT SRA Run Selector	Martin Bizet	Jul 16, 2020
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	244	BED BEDPE BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE272490	A PLURIPOTENT STEM CELL PLATFORM FOR in VITRO SYSTEMS GENETICS STUDIES of MOUSE DEVELOPMENT	Expression profiling by high throughput sequencing Other	Mus musculus	4	TXT VCF	Rachel Glenn	Jul 21, 2024
GSE113979	A central extended amygdala circuit that modulates anxiety	Expression profiling by high throughput sequencing Other	Mus musculus	14	TXT SRA Run Selector	Jessica Tollkuhn	May 31, 2018
GSE111134	A compendium of conserved cleavage and polyadenylation events in mammalian genes	Other	Homo sapiens Mus musculus Rattus norvegicus	128	TXT SRA Run Selector	Bin Tian	Aug 08, 2018
GSE124596	A conserved noncoding locus modulates random monoallelic Xist expression across a TAD boundary	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	56	BED BEDGRAPH BW CSV TXT SRA Run Selector	Nicolas Servant	Dec 01, 2019
GSE125972	A distal super enhancer mediates estrogen-dependent mouse uterine–specific gene transcription of Insulin-like growth factor 1 (Igf1)	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	38	BIGWIG HIC TXT SRA Run Selector	Sylvia C Hewitt	May 08, 2019
GSE188551	A dual role for CDK-Mediator in controlling Polycomb-dependent topology and priming genes for induction [Hi-C]	Other	Mus musculus	6	TXT SRA Run Selector	Robin H. van der Weide	Jan 03, 2024
GSE221413	A genome-wide screen in macrophages defines host genes regulating the uptake of Mycobacterium abscessus	Other	Mus musculus	6	TXT	Andrew Olive	Jan 13, 2023
GSE278914	A lineage-specific nascent RNA assay unveils principles of gene regulation in tissue biology.	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	49	BW TXT	Tudorita Tumbar	Dec 04, 2024
GSE80483	A multi-step transcriptional and chromatin cascade underlies motor neuron programming	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	887	BW TXT	Shaun Mahony	Dec 07, 2016
GSE211904	A multiple super-enhancer region establishes inter-TAD interactions and controls Hoxa function in cranial neural crest	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	67	BW HIC TXT	Filippo M. RIJLI	Apr 27, 2023
GSE211902	A multiple super-enhancer region establishes inter-TAD interactions and controls Hoxa function in cranial neural crest [PCHi-C]	Other	Mus musculus	14	TXT	Filippo M. RIJLI	Apr 28, 2023
GSE130308	A revised model for promoter competition based on multi-way chromatin interactions at the α-globin locus	Other	Mus musculus	6	TXT SRA Run Selector	A Marieke Oudelaar	Oct 11, 2019
GSE146916	A role for alternative splicing in circadian control of insulin secretion and glucose homeostasis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	23	BW CSV TXT SRA Run Selector	Mark Perelis	Aug 10, 2020