GEO Browser - GEO

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295 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Other			BW
GSE155280	scChIX-seq infers dynamic relationships between histone modifications in single cells	Other	Mus musculus	33	BAM BW CSV RDATA TXT SRA Run Selector	Jake Yeung	Nov 30, 2021
GSE246984	The impact of the embryonic DNA methylation program on CTCF-mediated genome regulation	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	28	BB BW	Julien Richard Albert	Jul 23, 2024
GSE84899	Cdx and T Brachyury co-activate growth signaling in the embryonic axial progenitor niche.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	55	BED BW CSV WIG SRA Run Selector	Jacqueline Deschamps	Dec 20, 2016
GSE93427	Analysis of non-methylated islands, sites of accessible chromatin and nascent transcriptome in C127 mouse cell line. [C127_BioCAP-ATAC-4sU]	Expression profiling by high throughput sequencing Other	Mus musculus	9	BED BW SRA Run Selector	Vincenzo Di Cerbo	Sep 05, 2017
GSE98119	The energetics and physiological impact of cohesin extrusion	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	352	BED BEDGRAPH BW HIC NARROWPEAK TXT SRA Run Selector	Seolkyoung Jung	May 01, 2018
GSE98466	The RNA-binding proteins Igf2bp3 and Lin28b cooperate to control a fetal-adult hematopoietic switch	Expression profiling by high throughput sequencing Other	Mus musculus	19	BED BW	Stefan A Muljo	Jun 27, 2019
GSE98671	Targeted degradation of CTCF decouples local insulation of chromosome domains from genomic compartmentalization	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	102	BED BW COOL FASTA TXT SRA Run Selector	Elphege Nora	May 25, 2017
GSE106553	Characterizing a role for HNRNPA2B1 during normal myogenesis	Other	Mus musculus	6	BED BW SRA Run Selector	Aaron M Johnson	May 22, 2022
GSE110602	Generation of tissue-specific circadian transcriptional programs by BMAL1 [ChIP-seq]	Other	Mus musculus	18	BED BW SRA Run Selector	Jerome Menet	May 08, 2018
GSE110604	Characterization of tissue-specific BMAL1 cistromes reveals new roles for enhancer-enhancer interactions in regulating rhythmic transcription	Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	26	BED BW	Jerome Menet	May 08, 2018
GSE112222	BAZ2A safeguards genome architecture of ground-state pluripotent stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	49	BED BW CSV HIC SRA Run Selector	Raffaella Santoro	Oct 20, 2020
GSE112717	Enhancer-dependence of gene expression increases with developmental age	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	39	BED BW HIC TXT SRA Run Selector	Jialiang Huang	Aug 19, 2020
GSE119218	PRC2 proteins EZH1 and EZH2 regulate postnatal hepatic maturation [srHC-seq]	Other	Mus musculus	15	BED BW SRA Run Selector	Jessica Mae Grindheim	Mar 01, 2019
GSE124596	A conserved noncoding locus modulates random monoallelic Xist expression across a TAD boundary	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	56	BED BEDGRAPH BW CSV TXT SRA Run Selector	Nicolas Servant	Dec 01, 2019
GSE125129	The ChAHP complex counteracts chromatin looping at Ctcf sites that have emerged from recent SINE expansions	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	77	BED BW TXT WIG XLS SRA Run Selector	Fabio Mohn	Sep 05, 2019
GSE129997	Re-configuration of Chromatin Structure During the Mitosis-G1 Phase Progression	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	75	BED BEDGRAPH BW NARROWPEAK TSV SRA Run Selector	Gerd A Blobel	Nov 27, 2019
GSE139117	Analysis of CRE-mediated chromatin interactions by CAPTURE2.0	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	105	BED BW WIG	Jian Xu	Feb 20, 2020
GSE143736	UTX constrains antiviral CD8+ T cell responses during chronic virus infection	Expression profiling by high throughput sequencing Other	Mus musculus	23	BED BW TXT SRA Run Selector	Joshua Starmer	Feb 09, 2021
GSE143963	HRI activates ATF4 to promote BCL11A transcription and fetal hemoglobin silencing	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	23	BED BW	Peng Huang	Apr 17, 2020
GSE147234	Integration of high-throughput reporter assays identify a critical enhancer of the Ikzf1 gene	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	8	BED BW TXT SRA Run Selector	Vahid Asnafi	Mar 31, 2021