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14 series

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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Other				BEDPE
GSE90561	Sox2 is required for functional chromatin connectivity in brain-derived neural stem cells.	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	65		BED BEDGRAPH BEDPE TXT	Federico Zambelli	Mar 07, 2019
GSE138822	The chromatin remodeling enzyme Chd4 regulates genome architecture in the mouse brain	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Mus musculus	38		BED BEDPE BIGWIG CSV HIC TXT SRA Run Selector	Jared V Goodman	Apr 13, 2020
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	244		BED BEDPE BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE214438	Age-associated chromatin re-organization in progenitor B cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Genome variation profiling by high throughput sequencing	Mus musculus	76		BED BEDPE TXT	Yaqiang Cao	Mar 01, 2024
GSE243851	Nuclear Organization of Lens Epithelium and Fiber Cells in Newborn Lens	Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8		BED BEDGRAPH BEDPE BW HIC NARROWPEAK	William Chang	Oct 16, 2023
GSE72164	Dynamic reorganization of extremely long-range promoter-promoter interactions between two states of pluripotency	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	76		BEDGRAPH BEDPE BW TXT SRA Run Selector	Shuang-Yin Wang	Dec 07, 2015
GSE169121	Tcf1 is essential for initiation of oncogenic Notch1-driven chromatin topology.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	61		BEDGRAPH BEDPE HIC TXT	Nadine Fournier	Jan 21, 2022
GSE90557	Genome-wide maps of chromatin state in neural stem/progenitor cells (NSC) from mouse neonatal forebrain [ChIA-PET]	Other	Mus musculus	5		BEDPE TXT SRA Run Selector	Federico Zambelli	Mar 07, 2019
GSE127807	DC3: Deconvolution and coupled clustering from bulk and single cell genomics data	Other	Mus musculus	17		BEDPE SRA Run Selector	Zhana Duren	Aug 14, 2019
GSE132057	Genome-wide profiles of chromatin interaction in mouse nephron progenitor cells [HiC]	Other	Mus musculus	6		BEDPE HIC SRA Run Selector	Andrew P McMahon	Jan 07, 2021
GSE149420	UTX condensation underlies its tumor suppressive activity	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	78		BEDPE NARROWPEAK TXT SRA Run Selector	Bi Shi	Jul 15, 2021
GSE153884	Global Genome Conformational Programming during Neuronal Development by CTCF and nFGFR1 - The Genome Archipelago Model	Other	Mus musculus	12		BEDPE SRA Run Selector	Brandon Decker	Sep 30, 2020
GSE183556	MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	550		BEDPE TXT	Asifa Akhtar	Aug 10, 2023
GSE200114	Dynamic promoter-enhancer contacts contribute to spatiotemporal gene expression during mouse fetal development	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	70		BEDPE BIGWIG HIC NARROWPEAK	Ming Hu	Sep 02, 2024