GEO Browser - GEO

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94 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Other			BEDGRAPH
GSE80154	Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	144	BEDGRAPH CEL WIG	James Bradner	Jan 29, 2018
GSE90034	Srf destabilizes cell identity	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	41	BEDGRAPH BW CEL TXT	Takashi Ikeda	Apr 18, 2018
GSE72164	Dynamic reorganization of extremely long-range promoter-promoter interactions between two states of pluripotency	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	76	BEDGRAPH BEDPE BW TXT SRA Run Selector	Shuang-Yin Wang	Dec 07, 2015
GSE76248	MiCEE: a ncRNA-protein complex mediates epigenetic silencing and nucleolus organization	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Mus musculus	12	BED BEDGRAPH TXT SRA Run Selector	Guillermo Barreto	Apr 06, 2018
GSE83471	Hierarchical RNA processing is rate limiting for mitochondrial ribosome assembly	Expression profiling by high throughput sequencing Other	Mus musculus	12	BEDGRAPH TXT SRA Run Selector	Stefan J Siira	Aug 04, 2016
GSE89520	Lamins organize the three dimensional genome from nuclear periphery in ES cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Mus musculus	40	BEDGRAPH TXT SRA Run Selector	Yixian Zheng	Nov 01, 2017
GSE90017	Transcriptional and cistromic profiling of mouse nephron progenitor cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	42	BEDGRAPH BW TXT	Andrew P McMahon	Jan 17, 2018
GSE90561	Sox2 is required for functional chromatin connectivity in brain-derived neural stem cells.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	65	BED BEDGRAPH BEDPE TXT	Federico Zambelli	Mar 07, 2019
GSE92412	Epigenetic modulation of a hardwired 3D chromatin landscape in two naive states of pluripotency.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	194	BEDGRAPH BIGWIG BW	Hendrik G Stunnenberg	Apr 30, 2019
GSE92434	RNA- and ATAC-seq data of Wt, Ebf1-KO and Pax5-KO FL-ProB-cells.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	18	BEDGRAPH TXT SRA Run Selector	Mikael Sigvardsson	Jun 08, 2018
GSE94431	Capturing the onset of PRC2-mediated repressive domain formation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	107	BEDGRAPH BW	Danny Reinberg	Jun 21, 2018
GSE96611	Interplay between genome topology and gene regulation during somatic cell reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	57	BEDGRAPH BW TSV	Thomas Graf	Jan 30, 2018
GSE97148	Clonally stable Vκ allelic choice instructs Igκ repertoire	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	32	BEDGRAPH TXT SRA Run Selector	Yehudit Bergman	Apr 01, 2017
GSE98063	Mll3 and Mll4 facilitate enhancer RNA synthesis and transcriptional elongation from promoters independently of H3K4 monomethylation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	48	BEDGRAPH BW CSV SRA Run Selector	Kristel Dorighi	May 05, 2017
GSE98119	The energetics and physiological impact of cohesin extrusion	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	352	BED BEDGRAPH BW HIC NARROWPEAK TXT SRA Run Selector	Seolkyoung Jung	May 01, 2018
GSE98140	SET1A/COMPASS and shadow enhancers in the regulation of homeotic gene expression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	193	BEDGRAPH BW SRA Run Selector	Ali Shilatifard	May 09, 2017
GSE100733	LRPPRC-mediated folding of the mitochondrial transcriptome	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	28	BED BEDGRAPH TXT	Stefan J Siira	Nov 21, 2017
GSE103667	Transcriptome-wide profiling of translation efficiency using mRNA-seq and Ribo-seq in ER stress-induced NIH3T3 cells	Expression profiling by high throughput sequencing Other	Mus musculus	8	BEDGRAPH TXT SRA Run Selector	Yumi Woo	Jan 01, 2018
GSE106423	Epitranscriptomic m6A Regulation of Axon Regeneration in the Adult Mammalian Nervous System	Expression profiling by high throughput sequencing Other	Mus musculus	24	BED BEDGRAPH TXT SRA Run Selector	Guo-li Ming	Jan 17, 2018
GSE115110	NF-Y controls fidelity of transcription initiation at gene promoters through maintenance of the nucleosome-depleted region	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	29	BEDGRAPH BIGWIG BW SRA Run Selector	Raja Jothi	Jul 01, 2019