GEO Browser - GEO

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398 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL16417	Other
GSE84589	Cis-regulatory landscape of four cell types of the retina	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	synthetic construct Mus musculus Adeno-associated virus	64	TAB SRA Run Selector	Dirk Schuebeler	Oct 25, 2017
GSE84888	Distinct roles for motif affinity, chromatin state, and co-regulatory motifs in PPARγ binding and enhancer activity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	synthetic construct Mus musculus	21	TXT SRA Run Selector	Sharon R Grossman	Feb 03, 2017
GSE112601	Genome-wide CRISPR-Cas9 interrogation of splicing networks reveals a mechanism for recognition of autism-misregulated neuronal microexons	Expression profiling by high throughput sequencing Other	synthetic construct Mus musculus	122		Ulrich Braunschweig	Oct 12, 2018
GSE172058	Parallel functional testing identifies enhancers active in early postnatal mouse brain	Other	synthetic construct Mus musculus Homo sapiens	15	CSV SRA Run Selector	Alexander Star Nord	Apr 15, 2021
GSE180875	HITI and INDEL analysis by next-generation sequencing	Other	Sus scrofa Mus musculus	4	FASTA TXT SRA Run Selector	Lucio Di Filippo	Nov 11, 2021
GSE225619	Molecular determinants of mouse adaptation of rat hepacivirus	Other	Rattus norvegicus Mus musculus	55	XLSX	Troels K H Scheel	Feb 27, 2023
GSE43390	Pausing of RNA polymerase II regulates mammalian developmental potential	Expression profiling by high throughput sequencing Other	Mus musculus	12	BEDGRAPH BW SRA Run Selector	Karen Adelman	Mar 12, 2015
GSE50907	fourSig: A Method for Determining Chromosomal Interactions in 4C-Seq Data	Other	Mus musculus	3	TXT SRA Run Selector	Rex Lee Williams	Feb 22, 2014
GSE52279	Role of SWI/SNF in acute leukemia maintenance and enhancer-mediated Myc regulation	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	42	CEL TXT WIG	Christopher R Vakoc	Dec 02, 2013
GSE52281	4C-seq indicate interactive sites with the sequence close from Meis2 promoter	Other	Mus musculus	1	BED WIG SRA Run Selector	Takaho A. Endo	Jan 15, 2014
GSE52595	Role of SWI/SNF in acute leukemia maintenance and enhancer-mediated Myc regulation (4C-seq)	Other	Mus musculus	6	WIG SRA Run Selector	Christopher R Vakoc	Dec 02, 2013
GSE52988	Attenuated sensing of SHH underlies adaptive evolution of bovine limbs	Other	Mus musculus	3	TXT SRA Run Selector	DBM Bioinformatics Core Facility	Jun 19, 2014
GSE53919	RNF17 blocks promiscuous activity of PIWI proteins in mouse testes	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Mus musculus	38	TXT	Vasily Vagin	Dec 17, 2014
GSE54863	FIREWACh: High-throughput Functional Detection of Transcriptional Regulatory Modules in Mammalian Cells	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	16	BED SRA Run Selector	Matthew Murtha	Mar 22, 2014
GSE58599	High-throughput sequencing of genome-wide translocations from stimulated wild-type or ATM-deficient B cells	Other	Mus musculus	16	TXT SRA Run Selector	Jiazhi Hu	Jun 18, 2014
GSE62534	Hairpin Capture of DNA End Structures reveals chromosomal DNA end structure with single nucleotide resolution	Other	Mus musculus	98	TXT SRA Run Selector	Jacqueline Payton	Dec 03, 2014
GSE65510	Transient Pairing of Homologous Oct4 Alleles Accompanies the Onset of Embryonic Stem Cell Differentiation	Other	Mus musculus	24	FA TXT SRA Run Selector	Cinthya J Zepeda-Mendoza	Feb 03, 2015
GSE66092	PAPERCLIP Identifies MicroRNA Targets and a Role of CstF64/64tau in Promoting Non-canonical poly(A) Site Usage.	Expression profiling by high throughput sequencing Other	Mus musculus Homo sapiens	32	BED BEDGRAPH TXT SRA Run Selector	Hun-Way Hwang	Feb 19, 2016
GSE67516	A comprehensive Xist interactome reveals cohesin repulsion and an RNA-directed chromosome conformation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	42	BED BW TXT XLS XLSX SRA Run Selector	John Edward Froberg	Jun 19, 2015
GSE67959	Multiplexed analysis of chromosome conformation at vastly improved sensitivity	Other	Mus musculus	14	TXT SRA Run Selector	James Oliver Joshua Davies	Nov 16, 2015