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14 series

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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter	Platform: GPL16417	Other				HIC
GSE95116	The nuclear matrix associating protein HNRNPU functions as a key regulator of 3D genome architecture	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	28		BW HIC TXT	Bo Wen	Dec 03, 2017
GSE116649	Megadomains and superloops form dynamically during X-chromosome inactivation but are dispensable for silencing and escape	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	65		BED BEDGRAPH BW HIC XLS XLSX SRA Run Selector	John Edward Froberg	Oct 31, 2018
GSE120393	Polycomb Mediated Chromatin Organization Reveals Transcriptional Silencers Required for Embryonic Development	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	107		BIGWIG BROADPEAK FPKM_TRACKING HIC NARROWPEAK TXT SRA Run Selector	Chia-Lin Wei	Jan 07, 2020
GSE121355	A pliable mediator acts as a functional, rather than an architectural bridge, between promoters and enhancers	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	201		BEDGRAPH BW HIC TXT SRA Run Selector	Seolkyoung Jung	Aug 01, 2019
GSE130224	The Fundamental Role of Chromatin Loop Extrusion in Physiological V(D)J Recombination	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Genome variation profiling by high throughput sequencing	Mus musculus	133		BED BEDGRAPH BEDPE BW HIC TXT	Frederick W Alt	Aug 19, 2019
GSE140975	Wapl repression by Pax5 promotes loop extrusion and V gene recombination at the Igh locus	Other Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	170		BED BEDGRAPH BW HIC TXT SRA Run Selector	Meinrad Busslinger	Jul 01, 2020
GSE210289	Igh and Igk loci use different folding principles for V gene recombination due to distinct chromosomal architectures of pro-B and pre-B cells	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	36		BED BEDGRAPH HIC MCOOL TXT	Meinrad Busslinger	Jan 15, 2023
GSE236182	Kdm1a safeguards the topological boundaries of PRC2-repressed genes and prevents aging-related euchromatinization in neurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	37		BEDGRAPH BEDPE BIGWIG BW HIC TXT WIG	Sergio Niñerola	Dec 04, 2023
GSE242585	ChIA-PET from Patski (ENCSR045WUV)	Other	Mus musculus	2		BED BEDPE BIGBED BIGINTERACT BIGWIG HIC TXT	ENCODE DCC	Sep 07, 2023
GSE242599	ChIA-PET from embryonic stem cell (ENCSR780SBE)	Other	Mus musculus	1		BED BEDPE BIGBED BIGINTERACT BIGWIG HIC TXT	ENCODE DCC	Sep 07, 2023
GSE242608	ChIA-PET from Patski (ENCSR564BAB)	Other	Mus musculus	3		BED BEDPE BIGBED BIGINTERACT BIGWIG HIC TXT	ENCODE DCC	Sep 07, 2023
GSE242649	ChIA-PET from embryonic stem cell (ENCSR179IQN)	Other	Mus musculus	1		BED BEDPE BIGBED BIGINTERACT BIGWIG HIC TXT	ENCODE DCC	Sep 07, 2023
GSE242656	ChIA-PET from embryonic stem cell (ENCSR995XUW)	Other	Mus musculus	1		BED BEDPE BIGBED BIGINTERACT BIGWIG HIC TXT	ENCODE DCC	Sep 07, 2023
GSE260914	ZNF143 is a transcriptional regulator of nuclear-encoded mitochondrial genes that acts independently of looping and CTCF	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	78		BED BW HIC MCOOL TSV TXT	Mikhail Magnitov	Mar 08, 2024