GEO Browser - GEO

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37 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL16417	Other			BED
GSE268678	Expansion of in vivo HDAd-transduced HSPCs by constitutive expression of tHMGA2 without additional treatment allows for therapeutically relevant transgene expression in HSPC progeny cells without clonal dominance.	Other	Mus musculus	18	BED FASTA TSV	Robert Policastro	Oct 08, 2024
GSE275427	Functional maps of a genomic locus reveal confinement of an enhancer by its target gene	Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	937	BED BW NARROWPEAK	Christina J.I. Moene	Aug 21, 2024
GSE260914	ZNF143 is a transcriptional regulator of nuclear-encoded mitochondrial genes that acts independently of looping and CTCF	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	78	BED BW HIC MCOOL TSV TXT	Mikhail Magnitov	Mar 08, 2024
GSE214438	Age-associated chromatin re-organization in progenitor B cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Genome variation profiling by high throughput sequencing	Mus musculus	76	BED BEDPE TXT	Yaqiang Cao	Mar 01, 2024
GSE242585	ChIA-PET from Patski (ENCSR045WUV)	Other	Mus musculus	2	BED BEDPE BIGBED BIGINTERACT BIGWIG HIC TXT	ENCODE DCC	Sep 07, 2023
GSE242599	ChIA-PET from embryonic stem cell (ENCSR780SBE)	Other	Mus musculus	1	BED BEDPE BIGBED BIGINTERACT BIGWIG HIC TXT	ENCODE DCC	Sep 07, 2023
GSE242608	ChIA-PET from Patski (ENCSR564BAB)	Other	Mus musculus	3	BED BEDPE BIGBED BIGINTERACT BIGWIG HIC TXT	ENCODE DCC	Sep 07, 2023
GSE242649	ChIA-PET from embryonic stem cell (ENCSR179IQN)	Other	Mus musculus	1	BED BEDPE BIGBED BIGINTERACT BIGWIG HIC TXT	ENCODE DCC	Sep 07, 2023
GSE242656	ChIA-PET from embryonic stem cell (ENCSR995XUW)	Other	Mus musculus	1	BED BEDPE BIGBED BIGINTERACT BIGWIG HIC TXT	ENCODE DCC	Sep 07, 2023
GSE212895	Treatment of TT1 mice with transposon-based gene therapy	Other	Mus musculus	30	BED	Lajos Mates	Mar 09, 2023
GSE210289	Igh and Igk loci use different folding principles for V gene recombination due to distinct chromosomal architectures of pro-B and pre-B cells	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	36	BED BEDGRAPH HIC MCOOL TXT	Meinrad Busslinger	Jan 15, 2023
GSE211864	Probing cell identity hierarchies by fate titration and collision during direct reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	16	BED BIGWIG BROADPEAK H5 LOOM TSV	Bob Hersbach	Sep 16, 2022
GSE211233	Multipartite super-enhancers function in an orientation-dependent manner [Capture-C]	Other	Mus musculus	48	BED TAB	Mira Tony Kassouf	Aug 18, 2022
GSE172088	HDAC1 and PRC2 mediate combinatorial control in SPI1/PU.1-dependent gene repression in murine erythroleukaemia.	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Mus musculus	69	BED BW	Christel GUILLOUF	Jul 24, 2022
GSE184490	Dynamic Runx1 chromatin boundaries affect gene expression in hematopoietic development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	132	BED BEDGRAPH TXT SRA Run Selector	Dominic Owens	Dec 16, 2021
GSE158460	Dnmt1 has global de novo methylation activity and is specifically targeted to transposable elements	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	90	BED BW CSV XLSX SRA Run Selector	Helene Kretzmer	Jun 18, 2021
GSE166123	Epigenetic dysregulation impairs high-fidelity DNA repair to promote cerebellar degeneration in spinocerebellar ataxia type 7	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	16	BED BIGWIG TXT	Pawel Michal Switonski	Feb 04, 2021
GSE145257	Identification of active gene regulatory elements in the human and murine TBX3 locus	Other	Homo sapiens Mus musculus	19	BED BIGWIG SRA Run Selector	Vincent M. Christoffels	Jul 20, 2020
GSE140975	Wapl repression by Pax5 promotes loop extrusion and V gene recombination at the Igh locus	Other Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	170	BED BEDGRAPH BW HIC TXT SRA Run Selector	Meinrad Busslinger	Jul 01, 2020
GSE131154	Fidelity of translation initiation is required for coordinated respiratory complex assembly	Expression profiling by high throughput sequencing Other	Mus musculus	8	BED WIG SRA Run Selector	Stefan J Siira	Jan 13, 2020