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390 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by high throughput sequencing	Mus musculus		BW
GSE35005	Epigenetic dynamics of 5-hydroxymethylcytosine during mouse spermatogenesis	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	18	BW SRA Run Selector	Chunsheng Han	Mar 12, 2012
GSE29714	Comprehensive Analysis of mRNA Methylation Reveals Enrichment in 3' UTRs and Near Stop Codons	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	11	BW TXT SRA Run Selector	Christopher E Mason	May 17, 2012
GSE37333	Smchd1 dependent and independent pathways determine developmental dynamics of CpG island methylation on the inactive X chromosome.	Methylation profiling by high throughput sequencing	Mus musculus	6	BW SRA Run Selector	Stephen Taylor	Oct 15, 2012
GSE41658	Methylomic analysis identifies the involvement of migration and adhesion genes in the ageing of primary haematopoietic stem cells	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	18	BW TXT SRA Run Selector	Gareth Wilson	Nov 01, 2013
GSE55426	Domains of genomewide gene expression dysregulation in Down syndrome	Methylation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	42	BW PAIR TXT	Audrey Letourneau	Apr 08, 2014
GSE57024	DNA methylation dynamics studies with MethylRO mouse	Methylation profiling by high throughput sequencing	Mus musculus	3	BW SRA Run Selector	Yasuyuki Ohkawa	Apr 24, 2014
GSE47890	Maintenance of DNA methylation in embryonic stem cells depends on the histone H3K9 methyltransferases (K9 KO Methyl-Seq)	Methylation profiling by high throughput sequencing	Mus musculus	2	BW SRA Run Selector	Ulrich Wagner	Jun 03, 2014
GSE47892	Maintenance of DNA methylation in embryonic stem cells depends on the histone H3K9 methyltransferases (K9 KO 5hmC-capture-seq)	Methylation profiling by high throughput sequencing	Mus musculus	2	BW SRA Run Selector	Ulrich Wagner	Jun 03, 2014
GSE47893	Maintenance of DNA methylation in embryonic stem cells depends on the histone H3K9 methyltransferases (Dnmt3ab KO Methyl-Seq)	Methylation profiling by high throughput sequencing	Mus musculus	6	BW SRA Run Selector	Ulrich Wagner	Jun 03, 2014
GSE47894	Maintenance of DNA methylation in embryonic stem cells depends on the histone H3K9 methyltransferases	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	22	BW	Ulrich Wagner	Jun 03, 2014
GSE58747	Perturbed adult sperm methylome after in utero undernutrition is associated with transmission of metabolic disease	Methylation profiling by high throughput sequencing	Mus musculus	4	BW SRA Run Selector	Hui Shi	Jul 16, 2014
GSE60377	Setdb1 is required for persistence of H3K9me3 and repression of endogenous retroviruses in mouse primordial germ cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	28	BW TXT SRA Run Selector	Matthew Lorincz	Sep 01, 2014
GSE48519	5mC Oxidation by Tet2 Modulates Enhancer Activity and Timing of Transcriptome Reprogramming during Differentiation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	92	BW TAB TXT SRA Run Selector	Gary Chung Hon	Sep 25, 2014
GSE63048	MORC1 represses transposable elements in the mouse male germ line	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	64	BW TXT WIG SRA Run Selector	Hume Stroud	Dec 12, 2014
GSE47085	Scl specifies hemogenic endothelium and inhibits cardiogenesis via primed enhancers	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Expression profiling by array Methylation profiling by high throughput sequencing	Mus musculus	47	BW CEL GTF	Tõnis Org	Jan 01, 2015
GSE56359	Scl specifies hemogenic endothelium and inhibits cardiogenesis via primed enhancers [RRBS]	Methylation profiling by high throughput sequencing	Mus musculus	4	BW SRA Run Selector	Tõnis Org	Jan 01, 2015
GSE60077	Length-dependent gene misregulation in Rett syndrome	Expression profiling by array Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	38	BW CEL TXT	Harrison Wren Gabel	Mar 12, 2015
GSE58108	Rlf, a widely-spaced zinc finger protein, is involved in maintaining epigenetic marks at CpG island shores and enhancer elements across the genome	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	22	BW TAB SRA Run Selector	Harald Oey	Mar 24, 2015
GSE57527	Altered epigenetic programming links intestinal inflammation to colon cancer (Bisulfite-seq)	Methylation profiling by high throughput sequencing	Mus musculus	9	BW SRA Run Selector	Guenter Raddatz	Jun 17, 2015
GSE57569	Altered epigenetic programming links intestinal inflammation to colon cancer	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	19	BW	Guenter Raddatz	Jun 17, 2015