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245 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by high throughput sequencing	Mus musculus		BEDGRAPH
GSE25689	Cell Type-Specific DNA Methylation at Intragenic CpG Islands in the Immune System	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	28	BEDGRAPH	Adrian Bird	May 23, 2011
GSE25899	Paternally-induced transgenerational environmental reprogramming of metabolic gene expression in mammals	Expression profiling by array Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	42	BEDGRAPH CEL GPR TXT	naomi habib	Jan 14, 2011
GSE44278	Redistribution of H3K27me3 upon DNA hypomethylation results in de-repression of polycomb-target genes	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	35	BEDGRAPH PAIR	James P Reddington	Feb 12, 2013
GSE52304	Premature termination of in vivo reprogramming leads to cancer development through altered epigenetic regulation	Expression profiling by array Methylation profiling by high throughput sequencing	Mus musculus	28	BEDGRAPH CEL	Yasuhiro Yamada	Feb 13, 2014
GSE71475	Epigenetic perturbations by Arg882-mutated DNMT3A potentiate aberrant stem cell gene expression program and acute leukemia development	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	46	BEDGRAPH BIGBED CEL	Rui Lu	Jun 23, 2016
GSE79771	DNA methylation is required for chromatin binding by Mbd2 and Mbd3 in ES cells	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	78	BEDGRAPH TXT	Sarah J Hainer	Nov 15, 2016
GSE84165	Derivation of ground-state female ESCs maintaining gamete-derived DNA methylation	Expression profiling by array Methylation profiling by high throughput sequencing	Mus musculus	93	BEDGRAPH CEL	Yasuhiro Yamada	Jul 27, 2017
GSE120592	Gene expression, chromatin state and DNA methylome in retinal pigment epithelium (RPE)	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	15	BED BEDGRAPH TXT	Dmitry Ivanov	Mar 19, 2019
GSE122337	Development and epigenetic plasticity of murine Müller glia	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	33	BED BEDGRAPH TXT	Dmitry Ivanov	Jul 23, 2019
GSE145953	Chromatin Protein PC4 Orchestrates B Cell Differentiation by Collaborating with IKAROS and IRF4	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	18	BED BEDGRAPH TXT	Kyoko Ochiai	Dec 22, 2020
GSE199214	The steroid hormone estriol (E3) regulates epigenetic programming of fetal mouse brain and reproductive tract	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by genome tiling array Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	24	BEDGRAPH CEL CHP GFF	Yuping Zhou	Mar 31, 2022
GSE20898	Genome-wide Analyses of Transcription Factor GATA3-Mediated Gene Regulation in Distinct T Cell Types	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	53	BED BEDGRAPH RPKM SRA Run Selector	Brian J Abraham	Aug 26, 2011
GSE35856	Maternal Influence on Exonic CpG Island Methylation in the Developing Hippocampus	Expression profiling by high throughput sequencing Methylation profiling by array Methylation profiling by high throughput sequencing	Mus musculus	29	BEDGRAPH PAIR WIG	Miklos Toth	Feb 04, 2013
GSE42880	MeCP2 binds to 5hmC enriched within active genes and accessible chromatin in the nervous system	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	50	BEDGRAPH WIG SRA Run Selector	Marian Mellen	Jan 14, 2013
GSE43433	Extensive changes in DNA methylation are associated with expression of mutant huntingtin	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	15	BEDGRAPH WIG	Christopher Ng	Jan 22, 2013
GSE44566	Genome-wide analysis identifies a functional association of Tet1 and Polycomb PRC2 in mouse embryonic stem cells but not in differentiated tissues	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	8	BED BEDGRAPH SRA Run Selector	Francesco Neri	Aug 10, 2013
GSE49624	Chromatin and Transcription Transitions of Mammalian Adult Germline Stem Cells and Spermatogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	73	BEDGRAPH TXT USEQ	Diana HP Low	May 19, 2014
GSE49764	Role of Tet1 in genomic imprinting erasure	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	25	BEDGRAPH	Li Shen	Dec 02, 2013
GSE62355	Transcription and Imprinting Dynamics in Developing Postnatal Male Germline Stem Cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	30	BEDGRAPH TXT USEQ SRA Run Selector	Diana HP Low	Nov 09, 2015
GSE63287	Kdm5b depletion in embryonic stem cells does not induce intragenic promoters or affect transcription	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	18	BEDGRAPH NARROWPEAK TXT	Andrew Johnston	Mar 21, 2020